Gene Amir_2436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2436 
Symbol 
ID8326625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2703327 
End bp2704814 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content74% 
IMG OID644942981 
Productsodium/hydrogen exchanger 
Protein accessionYP_003100222 
Protein GI256376562 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0140335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGGCG TCCAGATCCT GCTCATCGTC GGAGCGGGGA TCGCGATCAC GGCGGTGGCG 
CGGCGCAGGG GCGTGGAACC GGGCCTGATC GTGGTCGTCC TGGCCGCAGC CGCTTCGTTC
CTGCCCTGGA TGCCGAAGCT GGAGCTGGAC AGCGAGCTGA TCCTGGCGAT CGTCGTCCCA
CCCCTGCTCT ACTCGGCGGC GCGGGTCGCC GCGTTCACCG GGTTCGGCGC GAACCTCCGT
CCGATCGTCC ACCTGGGCGT GGTGCTGGTC GTGCTGACCA CGTTCGCGCT CGGCTTCGTG
GCCTCCTGGG CGCTGCCCTC CCTGGGCGGC GTCGCCTTCG TCCTCGGCGC CGTCCTGGCC
CCGCCCGACA CGATCACCAC CGTCACCCAC GGTGAGCGAA TCGGCCTCCC CGGACGGGTG
CGGTCCATCC TCATCGGGGA AAGCCTCGTC AACGACGCCA CTGCGCTGAC CTTGTTCAGC
ATCACCCTGC TGGCGGTCGA CGGCGGCCAC GCCACCATCG CAGGCGGCAT CACCCAGTTC
GCCTACAAGC TCACCGTCGG AGTCCTGGTG GGCGGCGCGT TCGCCGCCGC GACCCTGGCC
GTCCGCAAGC GCCTGGGCAA CACCACCCTG GAGACCACCC TGGTCCTCCT GCTCCCGTTC
ACCGTCTACC TGGCGGCCGA GGAGGTCCAC GCCTCCGGGA TCATCGCGGT GGTGGTGGCG
TCGTTCACCG TGACCGCCAA CATGACCCTG GACCCCGCGC ACCGCTACCC CGGCGCCCAC
CTGACCCGCA TCCAGGAGAA GTCCGTGTGG GCGGTCGTGG ACTTCCTGCT GGAGACGTTC
GTGTTCGCCT ACATCGGCCT GCGCCTGCGG TTCGTGCTCG CCGAGCAGGA GGACCTGGCC
GCGGTGCTGC TGGCGTCCGG CGTGCTGCTG GTCGCCGCGA TCGCCCTGCG CCTGGTCGGC
GTCTACGCCC TGTTCGGCCG CTGGGCCCTG TCCCTGCGCC TGGCGGGCCG CTCCCCGCGC
AAGCGCGAGC GCGCCAGGCG CCGCGAGGCC CGCACGTCCG GCCGCCGCCG CCGCCGCCCG
CGCCTGGGCG CCCCGACCGC GAAGGAGAAC CTGCTGGTCG GCTGGACCGG GATGCGCGGC
ATCCTGACCC TGGCGGCGGC CTCCGCCGTC CCGGAGTCGG TGCCCGGCAG GGACGCCGTC
CAGGCCGTCG CGCTCCTGGT CACCCTCGGC ACCCTCCTGA TCCAGGCCCC GACGATCGGC
CCGCTCGCCC GCGCCCTCGA CTTCGACGTC CGCGAGGAGC GCGCCGCCAC CGGGCGGATG
CGCGAGCGGG CCGAGGCCCT CGTGCGGCGT CACGAGGGCT TCGACGCGCA GCGGCAGGCA
CTGGGCGCCG CCGTCCGGGA CGGCGACCTC GACGAGGAGC TGGCGCGCGA CCTGATCGAG
GAGATCGACG TCCGCCAGGC CGCCGCCGAG CCCGGGCCCC GGCACTGA
 
Protein sequence
MNGVQILLIV GAGIAITAVA RRRGVEPGLI VVVLAAAASF LPWMPKLELD SELILAIVVP 
PLLYSAARVA AFTGFGANLR PIVHLGVVLV VLTTFALGFV ASWALPSLGG VAFVLGAVLA
PPDTITTVTH GERIGLPGRV RSILIGESLV NDATALTLFS ITLLAVDGGH ATIAGGITQF
AYKLTVGVLV GGAFAAATLA VRKRLGNTTL ETTLVLLLPF TVYLAAEEVH ASGIIAVVVA
SFTVTANMTL DPAHRYPGAH LTRIQEKSVW AVVDFLLETF VFAYIGLRLR FVLAEQEDLA
AVLLASGVLL VAAIALRLVG VYALFGRWAL SLRLAGRSPR KRERARRREA RTSGRRRRRP
RLGAPTAKEN LLVGWTGMRG ILTLAAASAV PESVPGRDAV QAVALLVTLG TLLIQAPTIG
PLARALDFDV REERAATGRM RERAEALVRR HEGFDAQRQA LGAAVRDGDL DEELARDLIE
EIDVRQAAAE PGPRH