| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2428 |
|---|
| Symbol | |
|---|
| ID | 8326617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 2696845 |
|---|
| End bp | 2698212 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644942973 |
|---|
| Product | FAD linked oxidase domain protein |
|---|
| Protein accession | YP_003100214 |
|---|
| Protein GI | 256376554 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTGC TCGACGCCCT GGCCGACCTC GCCCTGCCCG ATCCGGCCCT CACCGACCCC
GACGTCCTCG CGGGCCTGAG CCACGACGAC GCCGAGTGGG CCCCGGTCGG CGCCCCGCTG
GCCGCCGTCC GCCCGCGCAC CCCCGAGCAG GTCCGCGACG TCGTCCGCGC CTGCCTGGCG
CACGGCGCGC CGATCGTGCC GCGCGGGGCC GGTACGGGCC TGTCCGGCGG GGCCAACGCC
GTCGACGGCT GCGTCGTCGT CGCGCTCGAC CGGATGAACC GCGTCCTGGA GATCGACCCG
CTCGAACGCC TCGCCGTCGT CCAGCCCGGC GTGATCAACG ACGACCTGCG CAGGGCCGCC
GCCGAGCACG GCCTGTGGTA CCCGCCGGAC CCGGCCAGCT CCCCGTGGTC CACCATCGGG
GGGAACGTCG CCACCAACGC GGGCGGCCTG TGCTGCGTGA AGTACGGCGT CACCCGCGAC
TACGTCCTCG GCCTCCAGCT CGTCACCGGG ACGGGCGACC TGGTCCGCCT CGGCCGCCGC
ACCGCCAAGG GCGTCGCGGG CTACGACCTG ACCGGTCTCG TCGTCGGCTC CGAGGGCACC
CTGGGCGTGG TCACCGAGGT GACCGTCCGC CTGCGCCCCC TCCCACCCCC GGCGGTCACC
GTGGCGGGTT ACTTTCCGTC CGTCGTCACC GCCGGTGAGG CCGTCCGCGC GACGGCGGAG
GCGGGCCTGA CCCCGGCCGC GCTGGAGCTG GTCGACCGGC ACTGCCTGCG CGCCGTGGAC
GAGTGGAAGC GCACCGGCGT CTCGGCCGAC GCGGACGCCG TCCTCCTGGC CAGGTTCGAC
GACCCCGGCG GCGCGGCGGA GGCTGCGGCC GAGCGGATGC TGGCCTGCTT CGAGGCGGCG
GGCGCGACCT GGGCCGCCCG CTCCACCGAC GAGGCCGAGT CCGAGGCCCT GTTCTCCGCC
AGGCGCCTGG CCTACCCGGC TCTCGAACGC CTCGGCCCGG TCCTCACCGA GGACGTCTGC
GTGCCCAAGT CCAAGGTCGC GGAGATGCTG GGGCGCGTCG AGCGGGCCGC CGAGCGCCAC
GACGTCACCA TCGCGAACAT CGCCCACGCC GGCGACGGCA ACCTCCACCC CCTCCTCGTC
ACCCCACCGG GCGACGAGGC GGCGCGGGCA CGCGCGCAGG CGGCGTTCGA CGAGATCGTC
GCGGCGGCCC TGGAGCTGGG CGGCACCGTC ACCGGCGAGC ACGGCGTGGG CCTGCTCAAA
CGACCGGGCC TCGCGGCCGA GCTGTCCCCG GAGGTGCTGG CGATGCACCG CGCCGTGAAG
GCCGCCCTGG ACCCCTCGGG CCTGCTCAAC CCCGGCAAGG CGTTCTAG
|
|---|
| Protein sequence | MSLLDALADL ALPDPALTDP DVLAGLSHDD AEWAPVGAPL AAVRPRTPEQ VRDVVRACLA
HGAPIVPRGA GTGLSGGANA VDGCVVVALD RMNRVLEIDP LERLAVVQPG VINDDLRRAA
AEHGLWYPPD PASSPWSTIG GNVATNAGGL CCVKYGVTRD YVLGLQLVTG TGDLVRLGRR
TAKGVAGYDL TGLVVGSEGT LGVVTEVTVR LRPLPPPAVT VAGYFPSVVT AGEAVRATAE
AGLTPAALEL VDRHCLRAVD EWKRTGVSAD ADAVLLARFD DPGGAAEAAA ERMLACFEAA
GATWAARSTD EAESEALFSA RRLAYPALER LGPVLTEDVC VPKSKVAEML GRVERAAERH
DVTIANIAHA GDGNLHPLLV TPPGDEAARA RAQAAFDEIV AAALELGGTV TGEHGVGLLK
RPGLAAELSP EVLAMHRAVK AALDPSGLLN PGKAF
|
|---|
| |