Gene Amir_2422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2422 
Symbol 
ID8326611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp2691116 
End bp2691808 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content76% 
IMG OID644942967 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100208 
Protein GI256376548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.789804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGG AGGACGCGCC CAAGCGGGTG CGCGCGGACG CCGAGCGCAG CACCGCCCGC 
ATCCTGGAGG CGGCGCAGTC CGTGCTGGCC GGGGACCCGA ACGCGTCGCT GGAGCGCATC 
GCGGACGCGG CCGGGCTGGC GCGCGCGACC GTGCACCGGC GGTTCTCCTC GCGCAAGGCG 
CTGCACGACG CGCTGGTGGC CGACATCGGC GAGCGCTACC GGCAGGCCGT GCTCCAGGCG 
CGGGTGGCCA CCGCTCCCCC GCTGGTCGCG CTGCACCGGC TGGCGCAGGT GGTGTTCGAG 
CTGAAGGTGA GCCACCGGTT CGCGGTGGAG CTGGCGTCGG ACGAGGAGTG CGGGCCGGTG 
CTGTCGGGCG AGGTGCGGGA AGGCATCGAG CTGCTGTTCC GCAGGCTGCG GGAGGTCGGG 
GCGATCACCG CCGAGGACCC GCTGTGGTGC AGGCAGCTGA TGATGGCGGT GCTGCACGCG 
GTCCACGTGA TGCCACCGGA CTCGCCCGCG CTGGGGTGCG CGGGAGCCGG AACCGGAGTG 
GGGCAGGCCG GAGTGGGGCA GGCGGGCGCA GGGGTGGACG GCGCAGGGGT GGACGGCGCC 
GGGCTGGAGG GCGAGGCGCT GTCGGGGGCG CGGGCGGACC TGCTGGTCGA GACGCTGACC 
AGGGCGCTGG GCGGCGGCGC CACGGCGGGC TGA
 
Protein sequence
MSAEDAPKRV RADAERSTAR ILEAAQSVLA GDPNASLERI ADAAGLARAT VHRRFSSRKA 
LHDALVADIG ERYRQAVLQA RVATAPPLVA LHRLAQVVFE LKVSHRFAVE LASDEECGPV 
LSGEVREGIE LLFRRLREVG AITAEDPLWC RQLMMAVLHA VHVMPPDSPA LGCAGAGTGV 
GQAGVGQAGA GVDGAGVDGA GLEGEALSGA RADLLVETLT RALGGGATAG