Gene Amir_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2417 
Symbol 
ID8326606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2674578 
End bp2675423 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content71% 
IMG OID644942962 
Productpyruvate formate-lyase activating enzyme 
Protein accessionYP_003100203 
Protein GI256376543 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02493] pyruvate formate-lyase 1-activating enzyme 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000163232 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGCA CGCTGATCGG CCCGACCACG ACGGGTTCGG TGCACCCGAT GACGACAGGC 
GCGATGCAGC CCAGGGATGG GCAGGTCAGG GGCGGGCAGC CCAGGGGTGG GCAGGTCAAG
CCGATCAGCG GCACGGTCCA CTCGTGGGAC CTGGCCACGG CGGTCGACGG GCCAGGGACG
CGGTTCGTGG TGTTCACCAG CGGGTGCCCG CTGCGGTGCC TGTACTGCCA GAACCCCGAG
ACGTGGAAGA TGCGCGACGG GACGGTGGTG ACGGCCGAGG AGATCATGGC CGAGGCCGAG
CCGTACCGGC GGTTCATCCA GGTCGCGGGT GGCGGGTTCA CGGTGAGCGG CGGGGAGCCG
CTGCTCCAGC CGGTGTTCAC CGGGGAGCTG TTCCGGCGGG CCAAGGAGTG GGGGATGCAC
ACCGCCCTGG ACACCTCCGG GTACCTGGGG ATGCGGGCGT CGGACGAGCT GCTGGCGGAC
GTGGACCTGG TGCTGCTGGA CGTGAAGTCC TGGTTCCCTG GGACCTATCG GCGGGTGACC
GGTGGTGAGG TGGCGCCGAC GCTGGACTTC GCGCGGCGGT TGGCGGACCT GGGCAAGGCG
GTGTGGGTGC GGTTCGTGCT CGTGCCAGGG CACACGGACG CGGAGGACAA CGTGGCCGGG
GTCGCGGACT TCGCGGCCTC GCTGGGGAAC GTGGAGCGGG TGGACGTGCT CCCGTTCCAC
AAGCTCGGGG AGAGCAAGTA CCAGGAGTTG GGGATCAAGT TCCCGCTGGC GGGGACGCCC
ACGCCCACTC CGGCGCTGGT GGCTCGGGTT CGGGAGCAGT TCGCGGAGCG TGGGCTCGTG
GTGTGA
 
Protein sequence
MTSTLIGPTT TGSVHPMTTG AMQPRDGQVR GGQPRGGQVK PISGTVHSWD LATAVDGPGT 
RFVVFTSGCP LRCLYCQNPE TWKMRDGTVV TAEEIMAEAE PYRRFIQVAG GGFTVSGGEP
LLQPVFTGEL FRRAKEWGMH TALDTSGYLG MRASDELLAD VDLVLLDVKS WFPGTYRRVT
GGEVAPTLDF ARRLADLGKA VWVRFVLVPG HTDAEDNVAG VADFAASLGN VERVDVLPFH
KLGESKYQEL GIKFPLAGTP TPTPALVARV REQFAERGLV V