| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2405 |
|---|
| Symbol | |
|---|
| ID | 8326594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 2664524 |
|---|
| End bp | 2665408 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644942950 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003100191 |
|---|
| Protein GI | 256376531 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000181172 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTGG CGCGCAGGCT GGAACTGGCG CTGCTGCTGA CCCCGGCGCT CCTGCTGTTC
GGGCTGTTCG TCCTGGCCCC CATGGCGATC GCGGGCTTCT ACAGCGCCTA CGACTGGAAC
GGCTTCGGCC CGCTCACCGA CTTCGTCGGC TGGCGCAACT ACGCCGACGC GCTGACCGGG
AAGGTGTTCC AGGACGCCTT CTGGCACAAC GCGGTCATCG CGGTCCTGTC GATCGCGGTG
CAGCTGCCGC TGAGCATCGG CCTCGCGCTG CTGCTCAACC GCCGCCTGCG CGGTCGGGCG
GCCCTGCGCG CCATCGTGTT CGCCCCGTAC GTGCTGTCCG AGGCGATCAC CGCCGTGGTG
TGGCTGATGG TGCTGCAACC CGGCGGGTTC GCCGACCGGG TGCTCGGCGC CGTCGGCCTC
GGCGACCTCG TGCAGCAGTG GCTCGCGGAC CCGGAGGTGG TGCTCTACAC CCTGTTCGGC
GTGATCACCT GGAAGTACCT GGGCTTCGGC ATCATCCTGC TGCTGGCCGG GCTCCAGGGC
ATCCCCGAGG AGCTGCGCGA GGCCGCCGCG CTGGACGGCG CGACCCCGTG GCAGACCACC
AGGCACGTGC TGCTGCCGCT GCTCGGCCCG ACCGTCCGCA TCTGGGTGTT CCTGTCGGTC
ATCGGCTCGC TCCAGCTGTT CGACCTGGTC TGGATCATGA CCCTGGGCGG CCCGGCGAAC
GCCTCCACCA CCATGGCGAC CTACCTGGTG GACCACGGCT TCAAGCGCTA CGAGATCGGC
TACGGCAGCG CCGTCGCGGT CCTGGTGTTC GTGGTCTGCT TCGCGTTCGC CCTGCTGTAC
CAGCGCTTCG CGCTGCGCCG CGACACCGAG GGGGCGCTGG GCTGA
|
|---|
| Protein sequence | MPVARRLELA LLLTPALLLF GLFVLAPMAI AGFYSAYDWN GFGPLTDFVG WRNYADALTG
KVFQDAFWHN AVIAVLSIAV QLPLSIGLAL LLNRRLRGRA ALRAIVFAPY VLSEAITAVV
WLMVLQPGGF ADRVLGAVGL GDLVQQWLAD PEVVLYTLFG VITWKYLGFG IILLLAGLQG
IPEELREAAA LDGATPWQTT RHVLLPLLGP TVRIWVFLSV IGSLQLFDLV WIMTLGGPAN
ASTTMATYLV DHGFKRYEIG YGSAVAVLVF VVCFAFALLY QRFALRRDTE GALG
|
|---|
| |