| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2395 |
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| Symbol | |
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| ID | 8326584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2655266 |
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| End bp | 2656051 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644942940 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003100181 |
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| Protein GI | 256376521 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGTC CGAAGCCGCC GGACGAGACG CGCGGCGTCC TGGTCACCGG CGCCTCCAGG
GGCATCGGCC GCGCCACGGC CCTCGCGTTC GCCCGGCGCG GCGACCGGGT CGCGGTGCAC
TACGCCCACA ACCGGGCCGA CGCCGAGCGC ACCCTGGCCG AGCTGCCCGG CGGCGGCCAC
GTGCTGGTGC GCGGCGACCT GTCCGACCCG GAGGCCGCCG AGCTGGTCGC CGAGTCGGCC
GAGCACGGCC TGGGCGGGGT GGACGTGCTG GTCAACAACG CCGCCACCGC GCCGACCGAG
GACACCGCGC ACGCGATCGC CGAGGTCTCC TACGAGCACT GGCGGCGGGT GTGGCGCAGG
TCGGTGGACG TCAACCTGCT GGGCACGGTC GACCTGACGC ACCGGGTGGT CGCCCGCATG
GTCGCCAGGG CGGTGCCGGG CCGGGTGGTG AACATCGGCT CGCGCGGCGC GTACCGGGGC
GAGCCGGACC ACCCGGCGTA CGGCGCGACG AAGGCGGCGC TGCACGCGTT CGGCCAGTCG
ATCGCGGTGT CGCTGGCCCC GCACGGCATC GCGGTCGCCT CGGTCGCGCC GGGCTTCATC
GCGACCGAGC GGCAGGAGGA CAAGCTGTCC GGCGAGACCG GCGGCGACCT GCGCGCCCAG
AGCCGCTTCG GCCGCGTCGG CACGGCCGAG GAGGTCGCGG CGGCGGTGCT CTACCTCGCG
TCGCCGGAGG CGGCGTGGGC GTCGGGCGCG GTGCTGGACC TCAACGGGGC GTCGCACCTG
CGCTGA
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| Protein sequence | MTGPKPPDET RGVLVTGASR GIGRATALAF ARRGDRVAVH YAHNRADAER TLAELPGGGH
VLVRGDLSDP EAAELVAESA EHGLGGVDVL VNNAATAPTE DTAHAIAEVS YEHWRRVWRR
SVDVNLLGTV DLTHRVVARM VARAVPGRVV NIGSRGAYRG EPDHPAYGAT KAALHAFGQS
IAVSLAPHGI AVASVAPGFI ATERQEDKLS GETGGDLRAQ SRFGRVGTAE EVAAAVLYLA
SPEAAWASGA VLDLNGASHL R
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