Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2378 |
Symbol | |
ID | 8326567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2638942 |
End bp | 2639841 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644942923 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003100164 |
Protein GI | 256376504 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000241123 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGCGCA GCACCACCGT CATGACCGGG GCCAGCAGGG GCATCGGCCT CGTCGCCGCC CAGCACCTGC TCGCCACCGA CCGCGACCTC CAGCTCGTGG TCCTCGGCCG GGTCCCCGCC GAGCTCGCGG GCCCCAGGGT CACCGCCATC CCCGCCGACC TGTCCTCGCT GGCCGACGTG CACCGCGCCG CCACCGAGGT CACCACCCTC CTGGACGCGG GCCTGCCGCC GCTGCGCGGC CTGATCGCCA ACGCGGGCAT CCAGCACGCC GACGCCCGCA CCACCACCGT CGACGGCCAC GAGGCCACGT TCGCGGTCAA CGTCATCGCG AACCACCTGA TCCTGCGCGT GCTCGCCGAC CGCTTCACCA CCCCGGCCCG CGTCGTGATC ACCACCAGCG ACACCCACTT CGGCGACCTC AAGCACAACC TCGGCATGGT CCCCGCCCCG CGCTGGCGCG ACCCCGAGGT GCTCGCCGCG CCGGGCGCGT TCCCCAAGCC CGACAGCGCC CCCGCGGGCC GCACCGCCTA CTCCACCAGC AAGCTCGCCA CCGTCCACCA GGTGCACGAG CTGGCCCGCA GGCTCCCGCC CGGCGTCGAG GTCCTCGCCC ACAACCCCGG CTTCGTCCCC GGAACGGGCC TGACCCGCAA CGCGGGCCCC GCCGTCCGCT TCACCGCCAA GCACTTCCTC CCCCTGCTCG CCAGGACCCC GATCGCCACC GACGTGACCA CGGCGGGCCG CCACCTCGCC GAGTCCCTCA CCCGCCCGAT CACCTCCGGC GACTACGTCG ACCGCGACCA CGTCGCCGAC TCCGCCCCCC AGTCCTACGA CCGGGACCGC GAGGCCCGCC TGTGGGCGGT GCTGGACGAG CTGTGCGGGA CCTGGGTCCC TGCCCGGTAG
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Protein sequence | MERSTTVMTG ASRGIGLVAA QHLLATDRDL QLVVLGRVPA ELAGPRVTAI PADLSSLADV HRAATEVTTL LDAGLPPLRG LIANAGIQHA DARTTTVDGH EATFAVNVIA NHLILRVLAD RFTTPARVVI TTSDTHFGDL KHNLGMVPAP RWRDPEVLAA PGAFPKPDSA PAGRTAYSTS KLATVHQVHE LARRLPPGVE VLAHNPGFVP GTGLTRNAGP AVRFTAKHFL PLLARTPIAT DVTTAGRHLA ESLTRPITSG DYVDRDHVAD SAPQSYDRDR EARLWAVLDE LCGTWVPAR
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