Gene Amir_2372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2372 
Symbol 
ID8326561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp2634367 
End bp2635044 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content75% 
IMG OID644942917 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003100158 
Protein GI256376498 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000612735 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGTCA GCCCGGTTCG CCAGCCGCCG CTCGGCGAGC TGCTGCTCGC CCAGTTGCGC 
GTCCTGATCG TGCGCGGGGA GCTGGCCTCG GGGACGCACC TGGTGGAGGG GTGGATCGCC 
GAGCGGTTCG ACGTCAGCCG GGGGCCCGTC CGGGACGCGT TGCGGCAGCT GGAGGTCGAG 
GGGCTGGTCG AGACGCGCAA GCGCGGCGTG CACGTGCGCG GGTTGACGGA CGAGGACCTG 
GTCGAGCTGT ACTCGCTGCG CGGGGCCCTA GAGGAGCTGG CCGTGCGGGA GACCATCGCC 
CGGTCGGGGG ACGCGGACTG GGCGCCGCTG GACGACGCGC TGGCGCGGAT GCGGCGGAGC 
GCCGAGGCCG GGGACGCCGC CGGGTTCGTG GCCGCCGACC TGGACTTCCA CCTCGGGTTC 
TGCGGCATCG GCGGCAACCG CTGGCTGACC TCCACCTGGT CGCTGCACCG GCCGCTGTTC 
TCGGCGGTGC TGGAGATCAC CAACACCGGC CGCGACCTCG GGCCGATCGC CCTGGACCAC 
GCCGAGCTGT CGGACGTGGT GCGCTCCGGC GACGTGACCA AGGCGCTGGC CGAGCTGCGC 
GCGCACCTGG ACGACTCGTG CACCCGCATC CGCGCCGTCC TCGCCGCCCG CGACCCGGCG 
GCCGAGCGGC GGGGCTGA
 
Protein sequence
MIVSPVRQPP LGELLLAQLR VLIVRGELAS GTHLVEGWIA ERFDVSRGPV RDALRQLEVE 
GLVETRKRGV HVRGLTDEDL VELYSLRGAL EELAVRETIA RSGDADWAPL DDALARMRRS 
AEAGDAAGFV AADLDFHLGF CGIGGNRWLT STWSLHRPLF SAVLEITNTG RDLGPIALDH 
AELSDVVRSG DVTKALAELR AHLDDSCTRI RAVLAARDPA AERRG