Gene Amir_2357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2357 
Symbol 
ID8326546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2612790 
End bp2614169 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content73% 
IMG OID644942902 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_003100143 
Protein GI256376483 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCA CCTTCTCGGG GATCACCAGC GCCCTCGGCG GGATGCAGGC CGCGAGGCGC 
GGCCTGGAGG TCGCGGGCCA GAACATCGCG AACGCCCGCA CCGAGGGCTA CTCGCGCCAG
CGGGTGGAGA CCGCCGCGGT CGGGGGAACC GCGAACGCGG CCTTCTACGC CACCCCGCCC
GCCACGGCGG GCAGCGTCGA GGTCACCGGC ATCACCCGCA TGGCTGACGC CTTCCTGGAG
GCTCGTGGAC GCACCGAGCA CTCCAAGCAG GCCTACCTGG ACGGTCGCGA GGAAATCCTC
GCCACGACCG AGGGACTGTT CGACGAGCCG AGCGACAACG GCCTGCAGGC CCAGCTGACC
GGCATGTGGA AGTCGTGGAC CGACACCGCC GACAACCCCG GCGACAGCGC GGTCCGCAAC
CAGCTCGTGG TCTCCTCCGG CGTGGTCGCC GACCGGCTCA ACAACCTGGC GCAGACCCTC
GGCGGCGAGT ACAACGACAC CAGGGGCCGC CTGGACAGCA CCCTCAGCGA GATCAACACC
GGCGCCCGCA GGCTCGCCGA CCTCAACACC GCGGTCGTCC AGGCCAAGCA GCACGGCCTG
CCCGCCAACG AGCTGCTGGA CCAGCGCGAC CAGCTCGCGC TGCGCCTGGT CGAGCTGACC
GGCGGCACCA CCTCCACCGG CGCGGACGGC TCGCTGGACG TGCAGCTGGG CGGGGTCTCC
CTGGTCTCCG GCTCCACCGC CCGCTCGCTG ACCCTCACCG GCTCGGCCAC GCTCACCGGC
GCCGCGGGCG ACCCGGCCAC CGTGCGCTGG AGCGACGACG CCAGCGCCGC CCCCCTCACC
GGCGGCTCCG GCGGCGCGCT GCTGGAGGGC CTGACCACGA TCATGCCCGA CTACCTGGCC
CAGCTGGACC AGGTCGCCTC CAAGCTCGCC ACCGGCGTCA ACCAGCAGCA CAAGGCCGGG
TTCACCCCGA CCGGCGCCGC GGGCGGCGAC TTCTTCAGCG GCACCACCGC CGCCACCATC
AAGGTCGCCC TCACCAGCGG CGACCAGGTC GCGACCTCGT CGAGCGCCAC CCGCGCCCTC
GACGGCAGCA ACGCCGACGC GATCTCCGCG CTCGCCCGCT CGGCCACCGG CCCGGACGCC
TCCTACCGGC AGACCGTCGT GAAGATCGGC ATGGCGGTCC AGACCGCCGC GAGCCGCTCC
GCGACCCAGG CCTCCATCAC CGCGCAGGTC GACGCGGCCC GCCAGTCCTC CGCGGGCGTC
AACCTGGACG AGGAGCTCAC CTCGATGCTG ACCTACCAGC GCAGCTACGA GGCCGCCGCG
CGCGTCATGA GCGCGGTCGA CTCGATGCTG GACACCCTGA TCAACCGGAC CGGGAGGTAG
 
Protein sequence
MSSTFSGITS ALGGMQAARR GLEVAGQNIA NARTEGYSRQ RVETAAVGGT ANAAFYATPP 
ATAGSVEVTG ITRMADAFLE ARGRTEHSKQ AYLDGREEIL ATTEGLFDEP SDNGLQAQLT
GMWKSWTDTA DNPGDSAVRN QLVVSSGVVA DRLNNLAQTL GGEYNDTRGR LDSTLSEINT
GARRLADLNT AVVQAKQHGL PANELLDQRD QLALRLVELT GGTTSTGADG SLDVQLGGVS
LVSGSTARSL TLTGSATLTG AAGDPATVRW SDDASAAPLT GGSGGALLEG LTTIMPDYLA
QLDQVASKLA TGVNQQHKAG FTPTGAAGGD FFSGTTAATI KVALTSGDQV ATSSSATRAL
DGSNADAISA LARSATGPDA SYRQTVVKIG MAVQTAASRS ATQASITAQV DAARQSSAGV
NLDEELTSML TYQRSYEAAA RVMSAVDSML DTLINRTGR