| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2355 |
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| Symbol | |
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| ID | 8326544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 2611185 |
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| End bp | 2612069 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644942900 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily |
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| Protein accession | YP_003100141 |
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| Protein GI | 256376481 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGTTC AGGAGCAGGC GACGCAGGCG GTCCAGTCGG TTCGCACCGC CGCGGAGGCC
GAGGAGCTCA TCGTCAAGCA CCTCCCCCTG GTGGGCCACC TGGTCCGCGA GGTCCTGGCC
AGGGTGCCGG TCCACGTCCG CCGCGAGGAG CTCATGTCGG CCGGGAACCT GGCGCTGGTC
GCCGCGGCCA AGAGCTTCGA CGACTCGCGC GGCGCCCCCT TCGCCGCCTT CGCGGTGGTC
CGCGTCCGCG GCGCCCTGAT GGACGAGCTG CGCGGCCAGG ACTGGGCGAG CCGCTCGGTC
CGCGTGAAGG CCCGCAAGAT GAACGCCGTC CAGGACGAGT TCGTCTCCAA GCACGGCCGC
ACCCCCACCA CCGCCGAGAT CGCGGGCATC ATGGAGGTGG AGACCCGCGA GGTCACCGCC
GTCCAGGACG ACGTCCAGCG CTCCGCGCTG CTGAGCCTGC AGGGCTTCAC CGGCGGCGTG
CTGGAGGAGG TCGTGCCCGA GCGGCAGCCC GGCCCGGAGG AGACCCTGCT CGGCCGCGAG
CGCATCGGCT ACCTGCACTC GGCGATCGAC GCGCTGCCGG ACCGCCTGCG CACCGTGGTG
CGCGGCTACT TCTTCGAGGA GCGGCCGATG GCCGAGATCG CGGAGGAGCT GGGCGTGCAC
GAGTCCCGCG TGTCGCAGCT GCGCGCCGAG GCGATCGCGC TGCTGCGCGA CGGCCTGAAC
TCGCAGCTGG ACCCGGAGCG CCTGCCCGAG CCCGCCCGCC CCGACGGGTG CGCCGCGCGC
CGCAAGGCCG CTTACTACGC GTCGGTCGCC GCGCAGGGCA CCATGCGCAG CCGCCTGAGC
CACACCAGCT CGCTGGGCGT CCCGGTCATC GCGAAGACCG CCTGA
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| Protein sequence | MMVQEQATQA VQSVRTAAEA EELIVKHLPL VGHLVREVLA RVPVHVRREE LMSAGNLALV
AAAKSFDDSR GAPFAAFAVV RVRGALMDEL RGQDWASRSV RVKARKMNAV QDEFVSKHGR
TPTTAEIAGI MEVETREVTA VQDDVQRSAL LSLQGFTGGV LEEVVPERQP GPEETLLGRE
RIGYLHSAID ALPDRLRTVV RGYFFEERPM AEIAEELGVH ESRVSQLRAE AIALLRDGLN
SQLDPERLPE PARPDGCAAR RKAAYYASVA AQGTMRSRLS HTSSLGVPVI AKTA
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