Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2354 |
Symbol | |
ID | 8326543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2609457 |
End bp | 2610617 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644942899 |
Product | flagellin domain protein |
Protein accession | YP_003100140 |
Protein GI | 256376480 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCTTC GCATCAACTC CAACATCGCG GCGATGAACG CCTACCGCAA CCTCTCGGTG AACGACAAGC AGATGGCCGG CAGCCTGGAG AAGCTGTCGT CCGGCCTGCG GATCAACCGG GCGGCGGACG ACGCGGCGGG TCTGTCCATC AGCCAGGGCC TCACCTCTCA GATCGGTGGC CTGAAGGTCG CTGCGCGCAA CGCGCAGGAC GGCGTCAACG TCGTCCAGAC CGCGGACGGC GCCCTGAACG AGTCGGCTGA GATCCTGCAG CGCATGCGCG ACCTCGCTGT CCAGGCCTCC AACGGTGGTT CCCAGGACAC GAACGCGCGT GCCGCCGCGC AGACCGAGTT CGGCCAGCTC CAGAAGGAGC TCGACCGCAT CGCCAAGACC ACCTCCTTCG GTGGTCAGAA GCTGCTGGAC ACGGCGGGCA CCGCTTACAA CGGCACCTTC CAGGTCGGCG CCAACAACAC CGCCGACGAC CAGATCCAGG TCAACCTGGA CGCCACGGTC TTCGGCAGCT CCGGCGGCAC CAAGTCGAGC TACACCGTGT CGGGCGGCAC GTACGACTCC GCCACCCTCG ACACGAAGAC GATCACCGCG ACGCAGGGCG CCACGACCGC CACGGTCACG CTGGCCACGC CGGCTGACCT CGACGCCGTG GTCTCCCAGT TGAACGCTGA CGCCACCTTC TCGGGCGGCT TCACCGCCAG CAAGGACGGC GGTGAGCTGA AGATCGAGTC GAAGACCAAC GGCACGGGCG CGGTCACCCT CACGGGTACC TCGGGCCTGA CCGGCGCCGG CACGAACGGC ACCGCCGGCG CGACCGGCTT CGACTCCGCG GGCCTCGGCG TCGGTACCAC CGTCAAGGTG GACACCACCG CCAACGCCCA GTCCGCGATC GACTCGATCG ACAGCGCCAT CAAGGGGCTG TCGACCGCGC GGGCCCAGCT CGGTGCGTAC CAGAACCGGT TCGAGCACAC CATCAACAAC ATCAACGTCC AGGTGGAGAA CCTGTCCGCG TCCAAGTCGA ACATCACCGA CACGGACATG GCGCAGGAGA TGGTCAAGTT CACCCGGTCG CAGATCCTGT CGCAGGCTGG CACCGCCATG CTCGCGCAGG CCAACCAGGC GCCGCAGAAC GTTCTGCAGC TCCTGAGGTG A
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Protein sequence | MSLRINSNIA AMNAYRNLSV NDKQMAGSLE KLSSGLRINR AADDAAGLSI SQGLTSQIGG LKVAARNAQD GVNVVQTADG ALNESAEILQ RMRDLAVQAS NGGSQDTNAR AAAQTEFGQL QKELDRIAKT TSFGGQKLLD TAGTAYNGTF QVGANNTADD QIQVNLDATV FGSSGGTKSS YTVSGGTYDS ATLDTKTITA TQGATTATVT LATPADLDAV VSQLNADATF SGGFTASKDG GELKIESKTN GTGAVTLTGT SGLTGAGTNG TAGATGFDSA GLGVGTTVKV DTTANAQSAI DSIDSAIKGL STARAQLGAY QNRFEHTINN INVQVENLSA SKSNITDTDM AQEMVKFTRS QILSQAGTAM LAQANQAPQN VLQLLR
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