| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2347 |
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| Symbol | |
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| ID | 8326536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 2603991 |
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| End bp | 2605670 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644942892 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_003100133 |
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| Protein GI | 256376473 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.473038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGG ACCGGATCAA GGCGAGCGCC CAGGGCGTGC TCTCCGGTTT CAAGGCGTTC
ACGGCGGGCC AGAAGCTCGT GGCGGGGGCG ACGGTGCTGG CCGTGGTCGG CGCCATCGCG
TTCTACTTCC TCTGGGCCTC CAAGCCGACG TACGCCCCCC TCTACACGAG CCTGGCCTCG
AAGGACGCCA GCGCGATCGT CGACCAGCTC ACGGCCGCCG GGGTGACCTA CGAGCTGACC
GACGGCGGTC AGACGATCAT GGTGCCGCAG GACCAGGTGT ACCCGATGCG GTTGAAGATG
AGCGCGGCGA ACCTGCCGTC GCAGTCGGAC ACCGGCTACG CGCTGCTGGA CCAGCAGGGC
GTCACCACCT CGGAGTTCAT GCAGCAGGTC GGCTACCAGC GCGCCATGGA GGGCGAGCTG
GGCAGCACGA TCAAGGCGAT CGACGGGGTG ACCTCGGCGA GCGTGCACCT GGCGATCCCG
CAGAAGGACG TCTTCTCGGA CAGCGACTCG AAGCCGACGG CGGCCGTGCT GGTGGGGACC
GGCGCGGGCA AGTCGCTGTC GCAGGCCCAG GTGCAGACCA TCACGCACCT GGTGTCCTCC
AGCGTCGAGG GCATGAGCGC GGACGGCGTG ACCGTGGCGG GCACCGACGG CAAGGTGCTG
TCCACCGGCG GCGCGGACGG CGCGTCGGCC TCGGCGAACG GGGACCGGGA CGACCAGACC
AAGGCGTTCG AGCAGCGGCT GAGCACCTCG CTGCAGCAGA TGCTCTCGCA GGTCGTCGGC
CAGGACCACG CGGTGGTGCA GGTGACCGCC GACCTGGACT ACGACCAGAC CGAGACCAAG
AGCCAGACCT ACACCAGCGG TGACGGCACC GCTCCGCTGT CCGAGTCGTC CACGACGGAG
AGCTACACCG GCGACGGCGG GCAGAACGCG GCGGGCGGGG TGCTCGGCTC CACGAACGGC
ACCCTGAACG GGCTGGAGGG CAACACCACC AACGGCACCG GCGGCTCCGG CAACGGCACC
TACAACCAGG AGAAGTCGAC CAGGAACAAC GCGGTGAACT CGGTCATCGA GACCCGCCAG
TCGGCCCCCG GCAAGGTGCG CAAGCTGGGC GTGGCGGTGC TGCTGGACCA GAAGACGGCG
GGCGCCGTGG ACATGGCCGA GGTGGAGAGG ATCGCCTCCT CGGCCGTGGC CCTGGACACC
GCGCGCGGGG ACACGCTGGC CGTCAGCTCC ATGCCGTTCG ACACCAGCGC CGCGCAGCAG
GGCGAGGCCG CGGTCGCCGC CCAGCAGGCG CAGGCGCAGC AGGACGAGCT GATGGGCATG
GTCAAGACGG GCGTCGCGGG CCTCGGCGTG CTGGCGCTGC TGATCATGAC CATGATCGCC
ACCCGGCGCA GGCGCAAGCG CGCCGCCGCG GCGGCCGAGG CGGAGCTGGC CAAGCTCGAC
GAGCTCAAGG CCCAGCTGGA GCGCACCAGG ACCAGCGAGA TCGAGGCGGC CATCGCCGAG
AAGCAGGCGC TGGTCGCGGG CAACGACTTC CCGCAGCTGA GCGGCCCCAA GCGGGCCGAG
GTCGACCCGC TGGTGGTCGC CGAGCAGGAG AAGCGGATGG GCGAGATCCA GTCGCTCGTC
GACGAACAGC CCGAGGAAGT CGCGCGACTG CTGCGCGGCT GGCTCGCCGT GAAGGGATGA
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| Protein sequence | MNLDRIKASA QGVLSGFKAF TAGQKLVAGA TVLAVVGAIA FYFLWASKPT YAPLYTSLAS
KDASAIVDQL TAAGVTYELT DGGQTIMVPQ DQVYPMRLKM SAANLPSQSD TGYALLDQQG
VTTSEFMQQV GYQRAMEGEL GSTIKAIDGV TSASVHLAIP QKDVFSDSDS KPTAAVLVGT
GAGKSLSQAQ VQTITHLVSS SVEGMSADGV TVAGTDGKVL STGGADGASA SANGDRDDQT
KAFEQRLSTS LQQMLSQVVG QDHAVVQVTA DLDYDQTETK SQTYTSGDGT APLSESSTTE
SYTGDGGQNA AGGVLGSTNG TLNGLEGNTT NGTGGSGNGT YNQEKSTRNN AVNSVIETRQ
SAPGKVRKLG VAVLLDQKTA GAVDMAEVER IASSAVALDT ARGDTLAVSS MPFDTSAAQQ
GEAAVAAQQA QAQQDELMGM VKTGVAGLGV LALLIMTMIA TRRRRKRAAA AAEAELAKLD
ELKAQLERTR TSEIEAAIAE KQALVAGNDF PQLSGPKRAE VDPLVVAEQE KRMGEIQSLV
DEQPEEVARL LRGWLAVKG
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