| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2346 |
|---|
| Symbol | |
|---|
| ID | 8326535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 2602973 |
|---|
| End bp | 2603989 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644942891 |
|---|
| Product | flagellar motor switch protein FliG |
|---|
| Protein accession | YP_003100132 |
|---|
| Protein GI | 256376472 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1536] Flagellar motor switch protein |
|---|
| TIGRFAM ID | [TIGR00207] flagellar motor switch protein FliG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.122165 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCGC ACGACAACAT GACCGGCCTG CGCAAGGCGG CCGTGCTGCT GCTCCGCCTC
GGCAAGACCA ACTCCACGAA GGTCTTGTCG CTGCTCCAGG AGAACGAGGT CGAGCAGCTC
TCCAGCGAGA TCGTCCGGCT CGACTCGGTC AGCCATGAGG CCACCCAGTC GGTCACGGAC
GAGTTCTACG AGATGGCCAC CGCGCGCAAG TACGTCGCGC ACGGCGGCAT GGACTACGCG
CGGGACCTGC TGGTCAGCAC GCTGGGCTAC GACCGCGCGG ACGAGATCGT GCACCGGATC
GGCGCGCTGC TGCTGGACGT GCCGTTCAGC TTCCTGCAGC GGGCCGACCC CCGGCAGGTG
CTCTCGTTCC TGCAGGACGA GCACCCGCAG ACCATCGCGC TGGTGCTGGC GCACGTGCCC
TCCGGGCAGG CGTCGCAGGT GCTGGCGGGG CTGCTGCCCG AGAAGCAGGC CGAGGTCGCG
CACCGGATCG CCACGATGGA GCAGACCTCC CCCGAGGTGA TCCGCAAGGT CGAGTCGCTG
CTCCAGCGCC GGTTCTCGTC GCTGCTCCAG CCGTCGGACC TGTCCACGGT GGGTGGCGTC
GAGCCGCTGG TGAACATCAT CAACCGCTCG GACCGGGCGA CGGAGCGCTC CATCCTGGAG
GGCCTGACCA AGCGGTCCCC CGAGCTGGCC GAGTTCATCC GCAGCCAGAT GTTCATGTTC
GAGGACATCG TCGGGATCGA CGACCGGTCG ATGCAGCTGG TGCTGCGGCA GATCGAGCCG
AACGACCTGG CCACGGCGCT CAAGGGCGTC AGCAACGAGG TCAACCAGAA GATCGTGCGC
AACCTGTCCG AGCGCGCGGC CGAGAACCTG TCCGACGAGA TCGAGGTCCT CGGCTCGGTG
CGCCTGCGCA CCGTGGAAGA GGCCCAGGCC AAGATCATCC GGGTCATCCG CCAGTTGGAG
GAGTCCGGCC AGATCGTGCT GCGACGGAGC AACGAGGATG ACGAGTACGT CGACTGA
|
|---|
| Protein sequence | MAPHDNMTGL RKAAVLLLRL GKTNSTKVLS LLQENEVEQL SSEIVRLDSV SHEATQSVTD
EFYEMATARK YVAHGGMDYA RDLLVSTLGY DRADEIVHRI GALLLDVPFS FLQRADPRQV
LSFLQDEHPQ TIALVLAHVP SGQASQVLAG LLPEKQAEVA HRIATMEQTS PEVIRKVESL
LQRRFSSLLQ PSDLSTVGGV EPLVNIINRS DRATERSILE GLTKRSPELA EFIRSQMFMF
EDIVGIDDRS MQLVLRQIEP NDLATALKGV SNEVNQKIVR NLSERAAENL SDEIEVLGSV
RLRTVEEAQA KIIRVIRQLE ESGQIVLRRS NEDDEYVD
|
|---|
| |