Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2340 |
Symbol | |
ID | 8326529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2597106 |
End bp | 2597525 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644942885 |
Product | flagellar hook capping protein |
Protein accession | YP_003100126 |
Protein GI | 256376466 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.397876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGCC CCATCGGCGG CGCCGGGTCG ACGCAGGCCA CCACCCCCAA CCAGAGCAGC GGCCAGTCGG CGCTGGGCTC GCTGGGCGGG GACGCGTTCC TCAAGCTCCT CGTCGCCCAG CTGAAGTACC AGGACCCGAG CAACCCCACG GACTCCACCG CGTTCATGGC GCAGACCGCG CAGCTGACCT CGGTGGACAA GCTCAACTCG ATCGCGCAGC AGCAGACGCA GCTGGTCGCC TCGCAGCTGA GCGCACAGGC GGCGGGGCTG GTGGGCCGAG AGGTCACCTA CACCACCGCG AGCGGTGAGC GGGCGAGCGG CATCGTCTCC TCGACGACCT TCGGCTCCGC GCCCACGCTG CGCGTCGGCG CCGTCGACGT GCCGCTCTCC TCCATCACCG GAACGAGCGC GCAGGCCTAG
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Protein sequence | MTSPIGGAGS TQATTPNQSS GQSALGSLGG DAFLKLLVAQ LKYQDPSNPT DSTAFMAQTA QLTSVDKLNS IAQQQTQLVA SQLSAQAAGL VGREVTYTTA SGERASGIVS STTFGSAPTL RVGAVDVPLS SITGTSAQA
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