Gene Amir_2340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2340 
Symbol 
ID8326529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2597106 
End bp2597525 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content71% 
IMG OID644942885 
Productflagellar hook capping protein 
Protein accessionYP_003100126 
Protein GI256376466 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.397876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGCC CCATCGGCGG CGCCGGGTCG ACGCAGGCCA CCACCCCCAA CCAGAGCAGC 
GGCCAGTCGG CGCTGGGCTC GCTGGGCGGG GACGCGTTCC TCAAGCTCCT CGTCGCCCAG
CTGAAGTACC AGGACCCGAG CAACCCCACG GACTCCACCG CGTTCATGGC GCAGACCGCG
CAGCTGACCT CGGTGGACAA GCTCAACTCG ATCGCGCAGC AGCAGACGCA GCTGGTCGCC
TCGCAGCTGA GCGCACAGGC GGCGGGGCTG GTGGGCCGAG AGGTCACCTA CACCACCGCG
AGCGGTGAGC GGGCGAGCGG CATCGTCTCC TCGACGACCT TCGGCTCCGC GCCCACGCTG
CGCGTCGGCG CCGTCGACGT GCCGCTCTCC TCCATCACCG GAACGAGCGC GCAGGCCTAG
 
Protein sequence
MTSPIGGAGS TQATTPNQSS GQSALGSLGG DAFLKLLVAQ LKYQDPSNPT DSTAFMAQTA 
QLTSVDKLNS IAQQQTQLVA SQLSAQAAGL VGREVTYTTA SGERASGIVS STTFGSAPTL
RVGAVDVPLS SITGTSAQA