| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2339 |
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| Symbol | |
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| ID | 8326528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 2596215 |
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| End bp | 2597045 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644942884 |
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| Product | protein of unknown function DUF1078 domain protein |
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| Protein accession | YP_003100125 |
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| Protein GI | 256376465 |
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| COG category | [N] Cell motility |
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| COG ID | [COG4786] Flagellar basal body rod protein |
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| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.515219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCGTT CGCTGTTCAG CGGCATCAGC GGTCTCCGCG CCCACCAGCA GATGATGGAC
GTGACCGGCA ACAACATCTC GAACGTCAAC ACGACCGGCT TCAAGTCGTC GCAGACGGTG
TTCGAGGACA CGCTCAGCCA GACCCTGCGC GCCGCCCAGG CCGCGGGCGC CAACACCGCC
GCGACGAACC CGGCCCAGGT GGGTCTGGGC GTGCGGACCG CGGGCATCAA CACGAACTTC
AACCAGGGCA CCACGCAGAG CACCGGCCGC AACACGGACA TGCTCATCCA GGGCGACGGG
TTCTTCGTCG TCAACTCCTC CGGCCAGCAG CTCTACACGC GCGCGGGCGC CCTGTCGTTC
GACGCGGCGG GCCAGCTCAC CACCCCGGCG GGCGGCATCC TGCAGGGCTG GATGGCCAAC
GGCGCGGGCG TGGTCGACAA GAACCAGCCG GTGGCGGGCC TGACCGTGGA CAAGGGCACC
TACACCAGCT TCAGCGTCTC CGGCGACGGC ACGATCGTGG GCGTGCTGGC CAACGGCACG
CCGCGCACGG TCGGCCAGAT CGCCATGGCG AACTTCGCCA ACCCCGGCGG CCTGGACAAG
GCGGGCGGCT CGTTCTACCG GGCCACCGTC AACTCCGGCC CGGTCCAGAT CGGCGGCGCG
GGCGACAACG GCACCGGCGC GGTCGTGTCC GGCGCGCTGG AGATGTCCAA CGTGGACCTC
TCGCAGGAGT TCACCAACCT GATCATCGCC CAGCGCGGTT TCCAGGCGAA CTCGAAGGTG
ATCACCTCGT CGGACGAGAT CCTGCAGGAC CTGATGAACC TCAAGCGCTA A
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| Protein sequence | MLRSLFSGIS GLRAHQQMMD VTGNNISNVN TTGFKSSQTV FEDTLSQTLR AAQAAGANTA
ATNPAQVGLG VRTAGINTNF NQGTTQSTGR NTDMLIQGDG FFVVNSSGQQ LYTRAGALSF
DAAGQLTTPA GGILQGWMAN GAGVVDKNQP VAGLTVDKGT YTSFSVSGDG TIVGVLANGT
PRTVGQIAMA NFANPGGLDK AGGSFYRATV NSGPVQIGGA GDNGTGAVVS GALEMSNVDL
SQEFTNLIIA QRGFQANSKV ITSSDEILQD LMNLKR
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