| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2321 |
|---|
| Symbol | |
|---|
| ID | 8326510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 2578641 |
|---|
| End bp | 2579825 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644942866 |
|---|
| Product | response regulator receiver modulated CheB methylesterase |
|---|
| Protein accession | YP_003100107 |
|---|
| Protein GI | 256376447 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCTCGG TTCTGGTGGT CGACGATTCG GTGGTCATCC GACGACTGGT CGCCGACGTG
CTCAGCGCGG ACCCGAACAT CCGCGTGGTG GGCACGGCGG CGAACGGCAA GATCGCCCTG
ACGAAGATCG ACCAGCTCCA GCCTGACATC ATCACGCTGG ACGTCGAGAT GCCGATCATG
GACGGTGTCA CCACCGTCCG GGAGCTGCGC AAGAAGCACC CGCGCCTGCC TGTCATCATG
TTCAGCACGC TGACCAGCGT CGGGGCGGAC GCCACCCTGG CGGCCCTCGC CGCGGGCGCC
AGCGACTACG TCACCAAGCC CGCCAACGTG GGCAGCATCT CCGAATCGAT CTCCAGCGTG
CGCGAGCAGC TGCTGCCGCG CATCCACGCC CTGTGCGGGC GTCCCAAGCT GCCCCCGCCG
CCCGCCAGGC GCGGCCCGGT GGGCGCTCCC CCGGTCGGCG GCCCGCCGAC CCGCCCCGGC
GTGCCAGGAC GGCCCGGCGC ACCCGCGCCC GCCCGCTCCG CCGCCCCGGC CGGTCGTCCC
CAGGGCCGCC CGTCCGCTCC CGGAATCCCC GGCGGTCACA ACCGCGTCGA CGTGCTGGCC
ATCGGCTCGT CCACGGGTGG ACCCGAGGCG CTCCGCGTGG TGCTCTCCGA GCTGCCCGCG
AACCTCCCGG TCCCCGTGGT GGTCGTCCAG CACATGCCCC CGGTCTTCAC GGCGATGCTC
GCGCAGCGCC TGGACGCGGG GTGCAAGGTC AAGGTCGTCG AGGCGACCGC GGGCACGCCC
CTGCGTCCCG GCACGGTCTA CCTCGCTCCG GGTGACAAGC ACCTGGAAGT GGTTCGGGCG
GGCACGAACG TGCAGACCAA GCTGCACAAC GGCCCGCAGG AGAACCACTG CCGTCCCGCC
GTGGACGTGC TCTTCCGCTC GGTCGCCTCG GTCTACGGCG GGAACGTCCT GGCCGTGGTG
CTGACCGGGA TGGGGCACGA CGGCAGGGCG GGCGCACAGG TACTCCGGGC CAAGGGCGCC
CGGATCGCCG CACAGGACGA GTTCAGCTCG GTCGTGTGGG GAATGCCCGG CTCGGTCGTG
GAGGCGGGGC TGGCCGACGA GGTCCTGCCC CTGTCCGACA TGACCGGATA CATCCTCTCC
CAGCTCCCCG ATCGGGTAGC TGCCACAGCT CCGGGAGTGG CGTAG
|
|---|
| Protein sequence | MISVLVVDDS VVIRRLVADV LSADPNIRVV GTAANGKIAL TKIDQLQPDI ITLDVEMPIM
DGVTTVRELR KKHPRLPVIM FSTLTSVGAD ATLAALAAGA SDYVTKPANV GSISESISSV
REQLLPRIHA LCGRPKLPPP PARRGPVGAP PVGGPPTRPG VPGRPGAPAP ARSAAPAGRP
QGRPSAPGIP GGHNRVDVLA IGSSTGGPEA LRVVLSELPA NLPVPVVVVQ HMPPVFTAML
AQRLDAGCKV KVVEATAGTP LRPGTVYLAP GDKHLEVVRA GTNVQTKLHN GPQENHCRPA
VDVLFRSVAS VYGGNVLAVV LTGMGHDGRA GAQVLRAKGA RIAAQDEFSS VVWGMPGSVV
EAGLADEVLP LSDMTGYILS QLPDRVAATA PGVA
|
|---|
| |