Gene Amir_2304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2304 
Symbol 
ID8326493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp2562817 
End bp2563404 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content74% 
IMG OID644942849 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100090 
Protein GI256376430 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0000274121 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGGCC TCAGGGAGCG CCGTCGCCGC TCGACGCGCA AGGACATCTC CAAAGCCGCC 
GCCGAGCTGG TCCTCGAACG CGGCCTGGCC GACGTCACCG TCGAGGAGAT CGCCCACCGC 
GCGGGCGTCT CACCCCGGAC CTTCTTCAAC TACTTCCCCA GCAAGCGCTC CGCCGTCATC 
CCCGGCCCGG AACCGCTGCC CGCCGACCTG GTCGAGGCGT TCGTCGCCGA CCGCGACCGC 
CCCGTGCTCG ACGGCCTGGT CGCCCTCTTC TCCGACGAGC GCGTGCTCAC CGACACCGAG 
CGCGCCGACC TGCGCACCGC GCAGGAGCTG GTGACCCGCC ACCCCGAGCT GGTGCCCGTG 
CTGCACGAGC GGATGGCCGA GTTCGAGCGC GTCGTCGTCG ACGCGGTCGC GCGCCGCCTG 
GAGGCCCCCT CCGGCGACTG CCGCCCCGAG GTGGCCGCCG CGGTGCTGGG CGTGCTGCTG 
CGGGTGGCCA TGACTCGTGG TCTCGACGAC CCGACCCGGC AGTGCGTGAT CGGCGCCGAG 
TTCCAGGCCG ACCTGGCCCG CGCGTTCACC GCCCTGCGCG CGCTCTGA
 
Protein sequence
MTGLRERRRR STRKDISKAA AELVLERGLA DVTVEEIAHR AGVSPRTFFN YFPSKRSAVI 
PGPEPLPADL VEAFVADRDR PVLDGLVALF SDERVLTDTE RADLRTAQEL VTRHPELVPV 
LHERMAEFER VVVDAVARRL EAPSGDCRPE VAAAVLGVLL RVAMTRGLDD PTRQCVIGAE 
FQADLARAFT ALRAL