Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2298 |
Symbol | |
ID | 8326487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2555558 |
End bp | 2556727 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644942843 |
Product | ROK family protein |
Protein accession | YP_003100084 |
Protein GI | 256376424 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000166992 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCCTA CACCGGTCAA CCGGTCCCGG CTGCTCGCGC TGCTGCGCGA CGAGGGGCCG CTGTCGAGGG TCGCGCTGGG GGAGCGGTTG GGAGTGCCCA GGGCGGCGCT GTCGGCTGAG CTGGGGAGGT TGGGGGAGGT GGGGCTGGTC GAGGAGGGCG GGCCTGCGGC GAGTCGGGGT GGGCGGCGGT CGGTGCTGGT GCGGCTGGCC GCCGAGTTGC GGGTGCTGGC GGTGGCGGTG GGGGCCACGT CGGTGACGGT GGCGGTTGCG GACGGGCGGT GCGAGGTGTT GGCGCGGGTC ACTGAGGAGA GTGACGTGCG TGACGGGCCC GTGGTGGTGC TGGAGCGGGT GGTGCGGCTG GCGGCCAGGG TTCGGGAGCT GGCGCCGGGG AGGGTGGTCG CGGCGGGGGT CGGGCTGCCG GGACCGGTGA GCTTCCGGGA CGGGGTGCCG GTGGCGCCGC CGATCATGCC GGGGTGGGAC CGGTATCCGG TTCGGGATGA GCTGGCGGCG CGGTGGGGGT GTCCGGTCGC GGTGGACAAC GACGTGAACG CGATGGCGCT CGGGGAGCGG CACGCTGGGG TGGCGCGGTC GTTGGAGGAC TTGCTGTTCG TGAAGGTGGG GACGGGGGTG GGGTGCGGGA TCGTGCTCGG GGGGCGGGTG TACCGGGGGG TTGCGGGGGC TGCGGGGGAC ATCGGGCACA TCCGGTTGGA GGAGGACGGG CCGGTGTGCG CCTGTGGGGG GACCGGGTGC TTGGAGGCCT GGTTCAGCGG GGCCGCGCTG GCTCGGGACG CGGTGGGGTT GGCGCGGAGC GGGAGGTCGC CGTTGCTGGC GGCCGGGTTG GCCGAGCGTG GGGGGTTGAC GGCTCGGGAT GTGGGGGTTG CGGCGTCGGC TGGGGATTAC GCGGCTGCCG GGTTGGTGCG GGACGGGGGG AGGAGGTTGG GGCAGGTCGT GGCGTCGTTG GTGAGCTTCT TGAACCCGGG GATGGTGGTC ATCGGGGGTG GGGTTTCGGG GCTTGGGCAT TCGTTGTTGG CGGAGGTGAG GGGGGTGGTG CATCGGCGGT CGTTGCCGTT GGCGACGGGG AACCTGCCGA TCGTGCTGTC GGAGTTGGGG GATGAGGCCG GGGTGGTTGG GGCGGCTTGG ACCGCGACTG AGCGGGTTTT TGCGGTGTGA
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Protein sequence | MAPTPVNRSR LLALLRDEGP LSRVALGERL GVPRAALSAE LGRLGEVGLV EEGGPAASRG GRRSVLVRLA AELRVLAVAV GATSVTVAVA DGRCEVLARV TEESDVRDGP VVVLERVVRL AARVRELAPG RVVAAGVGLP GPVSFRDGVP VAPPIMPGWD RYPVRDELAA RWGCPVAVDN DVNAMALGER HAGVARSLED LLFVKVGTGV GCGIVLGGRV YRGVAGAAGD IGHIRLEEDG PVCACGGTGC LEAWFSGAAL ARDAVGLARS GRSPLLAAGL AERGGLTARD VGVAASAGDY AAAGLVRDGG RRLGQVVASL VSFLNPGMVV IGGGVSGLGH SLLAEVRGVV HRRSLPLATG NLPIVLSELG DEAGVVGAAW TATERVFAV
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