Gene Amir_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2298 
Symbol 
ID8326487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2555558 
End bp2556727 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content74% 
IMG OID644942843 
ProductROK family protein 
Protein accessionYP_003100084 
Protein GI256376424 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID[TIGR00744] ROK family protein (putative glucokinase) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000166992 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCCTA CACCGGTCAA CCGGTCCCGG CTGCTCGCGC TGCTGCGCGA CGAGGGGCCG 
CTGTCGAGGG TCGCGCTGGG GGAGCGGTTG GGAGTGCCCA GGGCGGCGCT GTCGGCTGAG
CTGGGGAGGT TGGGGGAGGT GGGGCTGGTC GAGGAGGGCG GGCCTGCGGC GAGTCGGGGT
GGGCGGCGGT CGGTGCTGGT GCGGCTGGCC GCCGAGTTGC GGGTGCTGGC GGTGGCGGTG
GGGGCCACGT CGGTGACGGT GGCGGTTGCG GACGGGCGGT GCGAGGTGTT GGCGCGGGTC
ACTGAGGAGA GTGACGTGCG TGACGGGCCC GTGGTGGTGC TGGAGCGGGT GGTGCGGCTG
GCGGCCAGGG TTCGGGAGCT GGCGCCGGGG AGGGTGGTCG CGGCGGGGGT CGGGCTGCCG
GGACCGGTGA GCTTCCGGGA CGGGGTGCCG GTGGCGCCGC CGATCATGCC GGGGTGGGAC
CGGTATCCGG TTCGGGATGA GCTGGCGGCG CGGTGGGGGT GTCCGGTCGC GGTGGACAAC
GACGTGAACG CGATGGCGCT CGGGGAGCGG CACGCTGGGG TGGCGCGGTC GTTGGAGGAC
TTGCTGTTCG TGAAGGTGGG GACGGGGGTG GGGTGCGGGA TCGTGCTCGG GGGGCGGGTG
TACCGGGGGG TTGCGGGGGC TGCGGGGGAC ATCGGGCACA TCCGGTTGGA GGAGGACGGG
CCGGTGTGCG CCTGTGGGGG GACCGGGTGC TTGGAGGCCT GGTTCAGCGG GGCCGCGCTG
GCTCGGGACG CGGTGGGGTT GGCGCGGAGC GGGAGGTCGC CGTTGCTGGC GGCCGGGTTG
GCCGAGCGTG GGGGGTTGAC GGCTCGGGAT GTGGGGGTTG CGGCGTCGGC TGGGGATTAC
GCGGCTGCCG GGTTGGTGCG GGACGGGGGG AGGAGGTTGG GGCAGGTCGT GGCGTCGTTG
GTGAGCTTCT TGAACCCGGG GATGGTGGTC ATCGGGGGTG GGGTTTCGGG GCTTGGGCAT
TCGTTGTTGG CGGAGGTGAG GGGGGTGGTG CATCGGCGGT CGTTGCCGTT GGCGACGGGG
AACCTGCCGA TCGTGCTGTC GGAGTTGGGG GATGAGGCCG GGGTGGTTGG GGCGGCTTGG
ACCGCGACTG AGCGGGTTTT TGCGGTGTGA
 
Protein sequence
MAPTPVNRSR LLALLRDEGP LSRVALGERL GVPRAALSAE LGRLGEVGLV EEGGPAASRG 
GRRSVLVRLA AELRVLAVAV GATSVTVAVA DGRCEVLARV TEESDVRDGP VVVLERVVRL
AARVRELAPG RVVAAGVGLP GPVSFRDGVP VAPPIMPGWD RYPVRDELAA RWGCPVAVDN
DVNAMALGER HAGVARSLED LLFVKVGTGV GCGIVLGGRV YRGVAGAAGD IGHIRLEEDG
PVCACGGTGC LEAWFSGAAL ARDAVGLARS GRSPLLAAGL AERGGLTARD VGVAASAGDY
AAAGLVRDGG RRLGQVVASL VSFLNPGMVV IGGGVSGLGH SLLAEVRGVV HRRSLPLATG
NLPIVLSELG DEAGVVGAAW TATERVFAV