| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2253 |
|---|
| Symbol | |
|---|
| ID | 8326442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 2493325 |
|---|
| End bp | 2494263 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644942798 |
|---|
| Product | diacylglycerol kinase catalytic region |
|---|
| Protein accession | YP_003100039 |
|---|
| Protein GI | 256376379 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
|---|
| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.380782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGCAGCA CGTCCCCGAC CGACTGGAGC GCCGCCGTGA CCAGAGCCGC CCTGCTGGTG
TCGCCGAACT CCGGCGGGGG AGCCGCCGCG CGGATCGCGG GCACCACCGC GGCCCTGCTG
CGCGAGTCCG TGGACGTGCT GGACCTGCTG GTTCCCACCA GCACGGCCGA GGCGGCGGCG
ATGGCCGAGC GGGTGGTGGG CGCGAACGTC GACGCGCTGG TGGTCCTGGG TGGTGACGGC
GCCGCGCACG TGGCGCTCCA GGCGTGCGCG GGCACCCCGA CCGCGCTCGC CGTCATCCCG
GCGGGCACCG GGAACGACCT GGCCAGGGCC CTCGGCTCCC GGTCGGCGGC GGACCTGGTC
CCGGCGCTGC GCTCGGGCGA GCGGCGCCGG GTCGACCTGG GGCGGGTGCG GGGTGGGCGG
TGGTTCGCGA CGGTGCTGTG CGCGGGGTTC GACTCGGCGG TCAACGCCCG CGCGAACCGG
ATGCGCTGGC CCGCCGGTCC GCGCCGGTAC GATCTGGCGC TGCTCGCGGA GCTGCTCGGC
CCGCGACCGG GGAGGCTGCT GCTGGGCACC CCGAAGGGGG AGATCGGGGT GAACGCGCTG
CTGGTCGCGG TCGGCAACAC CGGCAGCTAC GGCGGCGGCG TGCCGGTGTG CCCAGGGGCG
GACCCGGAGG ACGGGCTGTT CGACGTCACG GTGGTGGAGG CGGTGAGCAG GCGGACCCTG
CTGCGGGTGC TGCCCACCCT GCGGACCGGC GACCACACGG CGCACCCGGC GGTGCACACG
TTCCGGGCGT CCTCGATCCG GCTGGCCGGA CCGGCGTGGA CGGCTTACGC GGACGGTGAG
CGCCAGCGGG CCCTGCCGGT GACGGCGACC TGCGTGCCGG GTGCGCTGAG CACTATTCCT
TCAGTGCTGA CCGATTCCAG TATTCCGGCG CGGACCTGA
|
|---|
| Protein sequence | MGSTSPTDWS AAVTRAALLV SPNSGGGAAA RIAGTTAALL RESVDVLDLL VPTSTAEAAA
MAERVVGANV DALVVLGGDG AAHVALQACA GTPTALAVIP AGTGNDLARA LGSRSAADLV
PALRSGERRR VDLGRVRGGR WFATVLCAGF DSAVNARANR MRWPAGPRRY DLALLAELLG
PRPGRLLLGT PKGEIGVNAL LVAVGNTGSY GGGVPVCPGA DPEDGLFDVT VVEAVSRRTL
LRVLPTLRTG DHTAHPAVHT FRASSIRLAG PAWTAYADGE RQRALPVTAT CVPGALSTIP
SVLTDSSIPA RT
|
|---|
| |