Gene Amir_2244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2244 
Symbol 
ID8326433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp2481067 
End bp2481660 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content71% 
IMG OID644942789 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100030 
Protein GI256376370 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000061933 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCAAGC GCCCGACCTA CCACCACGGC GACCTGCGAT CGGCCCTGGT AGACGCCGGC 
CTGGCCCTGG TGGCGGAAGG CGGGGTGGCA TCCCTCTCGG TGGCCGAGGC CGCCCGCCGA 
ACCGGAGTGA GCCCAGCCGC CCCGTACCGC CACTTCCCGG CCAGAGACGA CCTGCTCACC 
GCCGTGGCAA CCAAACTGGC AAACCTCCTG GCAGAGGAAC TGCGCCAAGC CACCACCCCC 
CTGCCCACCC CGGAGGCCCG CCTGGCCGCA GCCGCAGGCG CCTGCGCCCT CGTGACAGCC 
CGCTACCGCG TAGGAATCGA CCTGATCTTC GCCGAGGACC TGAGGTCACG CGCGGACCAA 
GACCTGGCAG AGGCAGGCAG GGCAGTAATC GACCTGCTCC TCCCCGACGC CCTCACCACC 
ACCGGCACCC CGGAGGCAGC CCTCTCCCTC CTGGAAAAAC TCGTGGCCAC CGCACACGGC 
CACGGAGTCC TACTCCTAAC CGGCTTCGCC CGCCGCTTCG TCCCGGACGA GGCGGCACTG 
GTCGCATCGG CAACCGAGTC GGCGGCGATC CTGATCAGGG CAGCCCACAC CTGA
 
Protein sequence
MAKRPTYHHG DLRSALVDAG LALVAEGGVA SLSVAEAARR TGVSPAAPYR HFPARDDLLT 
AVATKLANLL AEELRQATTP LPTPEARLAA AAGACALVTA RYRVGIDLIF AEDLRSRADQ 
DLAEAGRAVI DLLLPDALTT TGTPEAALSL LEKLVATAHG HGVLLLTGFA RRFVPDEAAL 
VASATESAAI LIRAAHT