| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2231 |
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| Symbol | |
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| ID | 8326420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2466722 |
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| End bp | 2468521 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644942776 |
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| Product | AAA ATPase central domain protein |
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| Protein accession | YP_003100017 |
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| Protein GI | 256376357 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.377087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCACG GTCATCCCGG CAGCCAGCCC GACGAGGGCG GCGAGCTGAG CAATGGCAGC
AGCTCCGGCG AGTTGACGGC GCAGATCAGG TTCCTCGAGG ACGAGATCGC GCTGCTCCGC
CGCAAGTTGA CGGAATCCCC ACGACACGCC CGCCTGCTGG AGCAGCGGTT GGCCGAGGCC
ACCGAGCGCG TCAACCAGCT GACCGAGCGC AACACCAAGC TCATCGACAC CCTCCGCGAG
GCGCGCGGCC AGCTCCTCGC GCTCCGCGAG GAGGTGGACC GGCTGGCGCA GCCGCCCAGC
GGGTACGGCG TCTTCCTCGC CCGGTTCGAG GACGGCACGG TCGACGTGTT CACGTCCGGC
CGCCGGATGC GCGTGTCGGT CTCGCCGTCG GTCGAGACCT CCTCCCTGGT CATGGGTCAG
TCGGTGCGCC TGAACGAGGC GCTGACCGTG GTCGAGGGCG GCGACTTCGA GCGCACCGGC
GAGGTGTGCG CGCTGCGCGA GGTGCTCGAC GACGGCGGGC CCGAGGGCTC CGTCGCGCGG
GCCCTGGTCG TCGGCCACGC GGACGAGGAG CGGGTGGTCT GGCTCGCCCA GCCGCTGCTC
GACTCCCCGC TCAAGGCCGG GGACTCGCTC CTGGTCGACT CCAAGGCGGG CTTCGCCTAC
GAGCGGGTGC CCAAGGCCGA GGTGGAGGAC CTGGTGCTGG AGGAGGTGCC GGACGTCCGC
TACGAGGACA TCGGCGGCCT CTCCCGGCAG ATCGAGCAGA TCCGCGACGC CGTGGAGCTG
CCGTTCCTGC ACGCCGACCT GTTCCGCGAG TACAAGCTGC GCCCGCCCAA GGGCGTCCTG
CTCTACGGCC CTCCCGGCTG CGGCAAGACG CTCATCGCGA AGGCGGTCGC GAACTCGCTG
GCCAAGCAGG TCTCGAAGGC GCGCGGCGAG GACCACAAGG ACGCCAAGAG CTTCTTCCTC
AACATCAAGG GCCCCGAGCT GCTCAACAAG TTCGTCGGCG AGACCGAGCG GCACATCCGG
CTGATCTTCC AGCGGGCGCG GGAGAAGGCC TCCGAGGGCA CCCCCGTGAT CGTGTTCTTC
GACGAGATGG ACTCGATCTT CCGCACCCGC GGCAGCGGCG TGTCCTCCGA CGTGGAGACC
ACGATCGTGC CGCAGCTGCT CTCGGAGATC GACGGCGTCG AGGGCCTGGA GAACGTCATC
GTCATCGGCG CCTCCAACCG CGAGGACATG ATCGACCCGG CGATCCTGCG GCCGGGCCGC
CTCGACGTGA AGATCAAGAT CGAGCGCCCG GACGCCGAGG GCGCGAAGGA CATCTTCGCC
AAGTACCTGA CCGACGACCT GCCGCTGCAC GCCGACGACC TCACCGAGTT CGGCGGCGAC
CCGGCGGCCT GCATCCAGGG CATGGTGCAG CACACCGTCG AGCGCATGTA CGAGGAGACC
GACGAGAACC GGTTCCTGGA GGTCACCTAC GCCAACGGTG ACAAGGAGGT CCTGTACTTC
CGGGACTTCA ACTCCGGCGC GATGATCCAG AACATCGTGG ACCGGGCGAA GAAGTCGGCG
ATCAAGTCGC TGCTGGACAC CAAGCAGCCC GGCCTGTCGG TCCGGCACCT GATGGACGCC
ATCGTCGACG AGTTCGCCGA GAACGAGGAC CTGCCCAACA CGACCAACCC GGACGACTGG
GCGCGCATCT CCGGCAAGAA GGGGGAGCGG ATCGTGTACA TCCGCACCCT GGTGACCGGC
AAGAACCAGG AGACCGGTCG GGCCATCGAC ACGGCGACCA ACACGGGCCA GTACCTCTAG
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| Protein sequence | MPHGHPGSQP DEGGELSNGS SSGELTAQIR FLEDEIALLR RKLTESPRHA RLLEQRLAEA
TERVNQLTER NTKLIDTLRE ARGQLLALRE EVDRLAQPPS GYGVFLARFE DGTVDVFTSG
RRMRVSVSPS VETSSLVMGQ SVRLNEALTV VEGGDFERTG EVCALREVLD DGGPEGSVAR
ALVVGHADEE RVVWLAQPLL DSPLKAGDSL LVDSKAGFAY ERVPKAEVED LVLEEVPDVR
YEDIGGLSRQ IEQIRDAVEL PFLHADLFRE YKLRPPKGVL LYGPPGCGKT LIAKAVANSL
AKQVSKARGE DHKDAKSFFL NIKGPELLNK FVGETERHIR LIFQRAREKA SEGTPVIVFF
DEMDSIFRTR GSGVSSDVET TIVPQLLSEI DGVEGLENVI VIGASNREDM IDPAILRPGR
LDVKIKIERP DAEGAKDIFA KYLTDDLPLH ADDLTEFGGD PAACIQGMVQ HTVERMYEET
DENRFLEVTY ANGDKEVLYF RDFNSGAMIQ NIVDRAKKSA IKSLLDTKQP GLSVRHLMDA
IVDEFAENED LPNTTNPDDW ARISGKKGER IVYIRTLVTG KNQETGRAID TATNTGQYL
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