| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2228 |
|---|
| Symbol | |
|---|
| ID | 8326417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 2463053 |
|---|
| End bp | 2463880 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644942773 |
|---|
| Product | tRNA methyltransferase complex GCD14 subunit |
|---|
| Protein accession | YP_003100014 |
|---|
| Protein GI | 256376354 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCG CCAGTGGTCC GTTCCAGCCC GGAGACCGGG TGCAGTTGAC CGACCCGAAG
GGACGGCACT ACACCATCGT GCTCGAACCG GGCAAGGAGT ACCACACGCA CCGCGGCGCG
CTGCCGCACG ACAAGCTGAT CGGGCAGCCC GAGGGCAGCG TGGTGTCCTC CGTGGGCGGC
ACCTCGTTCC TGGCGCTGCG CCCGCTGCTC GCCGACTACG TGCTGTCCAT GCCCAGGGGC
GCGCAGGTCA TCTACCCCAA GGACGCCGCG CAGATCGTCA TGTACGGCGA CGTCTTCCCC
GGCGCGCGCG TGCTGGAGGC GGGCGCCGGG TCGGGCGCGC TGACCTGCTC GCTGCTGCGC
GCGGTCGGCG AGAAGGGCAG CGTGACCTCC TACGAGGTCC GCCAGGACCA CGCCGACCAC
GCGATCCGCA ACGTCGAGCA GTTCTTCGGC GAGCGGCCCG CCAACTGGTC GCTGACCGTG
GACGACCTGG CCACCCACAC CGGCGAGGTC GACCGGGTGG TCCTGGACAT GCTCGCGCCG
TGGGACGTGC TGCCGACCGT GGCCGCCAAC CTCATCCCCG GCGGCGTGCT CGTGGTGTAC
GTGGCGACCA CGACGCAGCT GTCGAAGGTC ACCGAGGCGC TGCGCGAGCA GCAGCACTGG
ACCGAGCCGC AGGCGTGGGA GACGCTCGTG CGGCCGTGGC ACGTGGTGGG CCTGGCGGTG
CGCCCCGAGC ACCGGATGAT CGCGCACACC GCGTTCCTGC TGACCACCCG CAGGCTCGCC
GACGGCGTCA CCCCGCCGCG CCCGCAGCGC AGGCCGTCGA AGGGCTGA
|
|---|
| Protein sequence | MSTASGPFQP GDRVQLTDPK GRHYTIVLEP GKEYHTHRGA LPHDKLIGQP EGSVVSSVGG
TSFLALRPLL ADYVLSMPRG AQVIYPKDAA QIVMYGDVFP GARVLEAGAG SGALTCSLLR
AVGEKGSVTS YEVRQDHADH AIRNVEQFFG ERPANWSLTV DDLATHTGEV DRVVLDMLAP
WDVLPTVAAN LIPGGVLVVY VATTTQLSKV TEALREQQHW TEPQAWETLV RPWHVVGLAV
RPEHRMIAHT AFLLTTRRLA DGVTPPRPQR RPSKG
|
|---|
| |