| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2191 |
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| Symbol | |
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| ID | 8326380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2422379 |
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| End bp | 2424196 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644942741 |
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| Product | glycoside hydrolase family 6 |
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| Protein accession | YP_003099982 |
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| Protein GI | 256376322 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTGC GCACTTTTGC CCGGTCACGG CGTTTCGCCG GGACCGCGGC AGCGCTCTCG
GTGACCGCTC TGGCCGCGAC CGCGGTCGTG GTGGGCGGCC CGAGCGCCAA CGCCGCACCG
GGGTGCCGGG TGAACTACAG CGTCACGAAC CAGTGGTCCG ACGGCTTCGG CGCCACGGTC
ACGGTCACCA ACCTCGGTGA TGCCATCACC GGCGGTTGGA CCCTGGAGTG GGACTTCGCC
GCAGGTCAGC GAGTCGGCCA GGGGTGGAAC GGCACGTTCG CCCAGTCGGG CGCGAAGGTG
ACCGTCACCA ACCCGACCTG GAGCCCCGGC CTCGGCAGCA ACGCGTCGGT GTCCCCCGGC
TTCAACGGCA CCTGGAGCGG CAGCAACCCC GTGCCGACCC AGTTCAAGCT GAACGGCACC
GTCTGCACCG GCTCGGTCGG CCCGACGTCC ACCACGACGA CGACCACGAC CACGACCACC
GGTGGCAACA CGACGACCAC GACCTCCGGG AACAACCAGC CCGGCACCAG GGTCGACAAC
CCGTACGTCG GCGCAGGCGT CTACGTCAAC CCGCAGTGGT CGGCCCGCGC CGCCGCCGAG
CCGGGCGGGT CGCGCATCGC GAACCAGCCC ACCGGCGTGT GGATGGACCG CATCAGCGCG
ATCGACGGCA ACGGCTCGCC CACCACGGGC AGCATGGGCC TGGTCGACCA CCTGGACGAG
GCGGTCAAGC AGGCCCGCAC CGCGCCCGGC GGCAACCTGG TCTTCCAGGT CGTCATCTAC
AACCTGCCCG GCCGCGACTG CGCCGCGCTC GCCTCGAACG GCGAGCTCGG GCCGAACGAC
CTGCCGCGCT ACAAGACCGA GTACATCGAC AAGATCGCGG GCATCCTCGC CCGGCCCGCC
TACGCGAGCC TGCGCATCGT GGCCGTGATC GAGATCGACT CGCTGCCCAA CCTGGTCACC
AACGTCTCGC CGCGGCCGAC CCAGACGCCG AACTGCGACA CGATGAAGGC CAACCAGAAC
TACCAGAACG GCGTGGCGTA CGCGGTGTCC AAGCTCGGCG ACATCGGCAA CGTCTACAAC
TACCTCGACT CCGGCCACCA CGGCTGGATC GGCTGGGGCG ACCCGATCCC CGAGTACGAC
AACTTCCACG CCTCGGCGAA GATGATGGCC TCGATCCTGG GCCGCGAGGG CGCCACCAAG
GCCGACGTGC ACGGCTTCAT CACCAACACG GCGAACTACT CCGCGCTGGA GGAGCCGTTC
TGGACGGTGG ACGACGTGGT CGGCGGCCAG GCGGTCAAGG AGAAGTCGAA GTGGGTCGAC
TGGAACGACT TCAACGGTGA GCTCGGCTTC GCCACCGCGT TCCGCCAGGA GCTCGTCGCC
AACGGCTTCG ACGCCGGCGT CGGTATGCTG ATCGACACTT CGCGCAACGG CTGGGGCGGC
TCCGGCAGGC CCACCGCCAA GTCGAGCTCG ACCGACCCGT CGGTCTACGT CGACCAGTCG
CGCATCGACA AGCGCATCCA GAAGGGCAAC TGGTGCAACC AGTCCGGCGC CGGTCTCGGT
GAGCGGCCCA AGGCCGCTCC CAAGCCGAAC ATCGACGCCT ACGTCTGGAT CAAGCCGCCG
GGCGAGTCCG ACGGCTCCAG CACCCAGATC CCGAACAACG AGGGCAAGGG CTTCGACCGG
ATGTGCGACC CGACCTACGG CGGCAACCCG CGCAACGGCA ACAACCCGTC CGGCGCGCTG
GCCAACGCCC CCATCTCGGG CCACTGGTTC TCCGCGCAGT TCCAGGAGCT CATGCGCAAC
GCCTACCCGA CGCTCTGA
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| Protein sequence | MSLRTFARSR RFAGTAAALS VTALAATAVV VGGPSANAAP GCRVNYSVTN QWSDGFGATV
TVTNLGDAIT GGWTLEWDFA AGQRVGQGWN GTFAQSGAKV TVTNPTWSPG LGSNASVSPG
FNGTWSGSNP VPTQFKLNGT VCTGSVGPTS TTTTTTTTTT GGNTTTTTSG NNQPGTRVDN
PYVGAGVYVN PQWSARAAAE PGGSRIANQP TGVWMDRISA IDGNGSPTTG SMGLVDHLDE
AVKQARTAPG GNLVFQVVIY NLPGRDCAAL ASNGELGPND LPRYKTEYID KIAGILARPA
YASLRIVAVI EIDSLPNLVT NVSPRPTQTP NCDTMKANQN YQNGVAYAVS KLGDIGNVYN
YLDSGHHGWI GWGDPIPEYD NFHASAKMMA SILGREGATK ADVHGFITNT ANYSALEEPF
WTVDDVVGGQ AVKEKSKWVD WNDFNGELGF ATAFRQELVA NGFDAGVGML IDTSRNGWGG
SGRPTAKSSS TDPSVYVDQS RIDKRIQKGN WCNQSGAGLG ERPKAAPKPN IDAYVWIKPP
GESDGSSTQI PNNEGKGFDR MCDPTYGGNP RNGNNPSGAL ANAPISGHWF SAQFQELMRN
AYPTL
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