Gene Amir_2173 details

Gene Information

• Locus tag: Amir_2173
• ID: 8326362
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 2403256
• End bp: 2405238
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 644942723
• Product: Beta-galactosidase
• Protein accession: YP_003099964
• Protein GI: 256376304
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1874] Beta-galactosidase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.243153
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGGCTGG GCGCTGCGGC GCGCGGCAGG CTGCTCTACG GCGGGGACTA CAACCCCGAG 
CAGTGGCCCG AGGAGGTGTG GGCCGAGGAC GTCGAGCTGA TGAAGCGGGC CGGGGTGAAC 
GTCGCCACGG TCGGCGTGTT CTCCTGGGCG ACCATCGAGC CGGAGCCGGG CGCGCGCGAG 
TTCGGCTGGC TCGACCGGGT GCTGTCCCTG CTGCACGCCA ACGGGATCGC GGTGTGCCTG 
GCCACCCCGA CGGCGTCGCC GCCGCCGTGG CTGGGCCACC GCCACCCGGA GACGCTGCCG 
GTGGACTTCG ACGGGCGCAG GCTGTCCTAC GGCTCGCGCA ACCAGTTCTG CCCCTCGTCC 
CCGGTCTACC GCAAGCGGTC GCTGGAGCTG GTGACGGACC TGGCGGCGCG GTACGCGCAC 
CACCCGGCGG TGGTGATGTG GCACGTGAAC AACGAGTACT GCGAGGTCTG CCACTGCGAC 
GTCAGCGCCG AGCACTTCCG GCGCTGGCTG CGCGCCAGGC ACGGCACGCT CGACGCGCTC 
AACGCCGCGT GGAGCACCGC GTTCTGGAGC CAGCGCTACG GCGACTGGGA CGAGGTCGTG 
CCGCCGCGCC GCGCCCCGTA CCTGATCAAC CCGGCGCAGC GGCTGGACTT CGCGCGGTTC 
TCCTCGGACG CGCTGCTGGA GTGCTTCCTG GCGGAGAAGG CGGTGCTGCG GGCGGCGAAC 
CCGGACGTGC CGATCACGAC GAACTTCATG GGCCTCGACC AGCCGATGGA CTACTGGTCG 
CTGGCCGCGC ACGAGGACGT CGTCTCGCAC GACTGGTACC CGGACCCCTC GGACCCGAAG 
TCGCACGTGG GCACGGCCAT CGCCTACGAC CTGGTGCGCT CGCTCGCGGG CGGGCCGTGG 
GCGCTGATGG AGCAGGCGGC GAGCGCGGTG AACTGGCGGC ACCGCAACCC GGCCAAGCCC 
GCCGGTCAGC TGCGGGCGCA GTCCGCGCAG GCCGTGGCGC GCGGCGCGGA CGCGGTGTGC 
TTCTTCCAGT GGCGGGCCTC GGCAGGCGGC GCGGAGAAGT TCCACTCCGG GATGCTGCCG 
CACGCCGGGC CGGACACGCG GGTGTTCCGC GAGGTGTGCG AGCTGGGCGC GGACCTGGCG 
AGGCTGGAGG AGGTCGTCGG CGCGGACGTG CGCGCGTCGG TGGCGTTCGC GCTGGACTGG 
GAGAGCTGGT GGGCGTGCCG GCTCGACGCG CACCCCGCCG GTGACTTCGA CCTGCTGGCG 
CGGGTCAGGG ACTTCTACGA GCCGCTGTTC GACCTCGGCG TGGCGGTGGA CTTCGTCCGG 
CCGGACGCGG ACCTGTCGGG GTACGCGCTG GTGGTCGTGC CGAACCTGTA CCTGCTGCGG 
GACGCGAGCC GCTTCGAGTC CTTCGTGGAC GGTGGCGGCA CGCTGCTGGT CGGGTTCTTC 
TCCGGCGTGG TGGACGGGAA CGACCGGATC CACCCCGGTG GCGCGCCCGG TCCGCTGCGG 
GAGCTGCTCG GGTTGACCGT GCACGAGATG GCGCCGGTCG AGCGCGAGCT GCGCTGCGAG 
TCCGAGCTGC TGGGGGAGTT CACCGCCGAC TTCTGGCTCG ACGACGTCGC CCCGCACGGG 
GCCGAGGTGA TCGCGCGCGC CGGGGACGCG CCGGTGGTGC TGCGGCACGG CCGCGCCTGG 
TACACCGCCA CCCGGCCCGA ACCCGCCGCC ACCGCGCGGC TGCTCGCCCA CCTGGTCGAG 
AGCGCCGGGG TGCCGCGCGC GCTGCCCGAG CTGCCCTCGG GCGTGGAGGC GGTGCGGCGG 
GGCGGGTTCC TGTTCCTGGT CAACCACAAC GACGACCCGG TGACCGTGAC CGTGCCCGGC 
GGCGGGGTCG ACCTGCTCGC CGGGGCGGGC ACGGGCGCCG GGGGCGGGCA GGGCGCCGAG 
GCCGCGCCCG CCGACGAGGT CGAACTCGGG AGGTTCGGTG TCGCCGTTCT CCGACAGCCC 
TAG 

 

Protein sequence

MGLGAAARGR LLYGGDYNPE QWPEEVWAED VELMKRAGVN VATVGVFSWA TIEPEPGARE 
FGWLDRVLSL LHANGIAVCL ATPTASPPPW LGHRHPETLP VDFDGRRLSY GSRNQFCPSS 
PVYRKRSLEL VTDLAARYAH HPAVVMWHVN NEYCEVCHCD VSAEHFRRWL RARHGTLDAL 
NAAWSTAFWS QRYGDWDEVV PPRRAPYLIN PAQRLDFARF SSDALLECFL AEKAVLRAAN 
PDVPITTNFM GLDQPMDYWS LAAHEDVVSH DWYPDPSDPK SHVGTAIAYD LVRSLAGGPW 
ALMEQAASAV NWRHRNPAKP AGQLRAQSAQ AVARGADAVC FFQWRASAGG AEKFHSGMLP 
HAGPDTRVFR EVCELGADLA RLEEVVGADV RASVAFALDW ESWWACRLDA HPAGDFDLLA 
RVRDFYEPLF DLGVAVDFVR PDADLSGYAL VVVPNLYLLR DASRFESFVD GGGTLLVGFF 
SGVVDGNDRI HPGGAPGPLR ELLGLTVHEM APVERELRCE SELLGEFTAD FWLDDVAPHG 
AEVIARAGDA PVVLRHGRAW YTATRPEPAA TARLLAHLVE SAGVPRALPE LPSGVEAVRR 
GGFLFLVNHN DDPVTVTVPG GGVDLLAGAG TGAGGGQGAE AAPADEVELG RFGVAVLRQP