| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2170 |
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| Symbol | |
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| ID | 8326359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2399697 |
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| End bp | 2401295 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644942720 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003099961 |
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| Protein GI | 256376301 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.76717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCGG CTGCCGGTGG TGCGCTGCTC GTCGGCTGCG GTGGGCCCGC GCCGCAGCAG
GGCGGCGGCG GTGGCGCGCT CAACTCGGAG GAGCTGGCCA AGCTGCTCCC GGCCTACTCG
CCCGTCGAGT ACGCCAAGCC CGACCTGCCC GGCGTCAACG GGTCCAAGGC AGGCTACCTG
AAGTTCCCCT CCACGCTCGT GGACGCGGTC AAGGAGAAGC CGCTCTCCGG CGGCGAGGTC
ACCGTCATGA CCCCGACGTT CTGGCCGGTG CCGCCGGGCC TCGGGCAGAA CTCCTACTAC
GACGCCGTGA ACGAGCGGCT CGGCGGCACG GTCAAGTTCG AGCTGGTGGC GGGCGCGGAC
TACGCGCAGA AGCTCGCGGC CATGATGGCG GGCAAGCAGG TGCCCGAGCT GACCGTCATG
CCCACCTTCA CCGTGCCGCC CCGGTTCAGC GCGGGCGTCG GCGAGGTGTT CCGCGACATC
GGCGGCCTCA TCGCGGGCGA CAAGGCCAAG GACTACCCGA TGCTCGCGGG CATCCCCACC
GCCGTGTGGG AGAACTGCGT CTACAACGGC AAGCTGTTCG CGGTGCCGTT CCCCGGCGAC
CTGTTCGCCG AGGCCACCTT CTACCGGCCC GAGCTGTTCG AGAGCCTCGG CGTCGACCCG
CGGGTCAAGT CCTTCGCGGA GCTGAAGGAC CTGTGCGCCA AGGTGAACGA CCCGGCGGGC
AACCGCTGGG CGGTCGGCGA CATCTTCCGC ACGCTCGTGC GCGCTCGGGG CGACAAGGGC
GACTGGCAGC GCGACTCCTC CGGCAAGGTC GTCAACCACA TCGAGACGCC CGAGTACGCC
GCGGCCATCC GCGACATGCG CGAGCTGTTC GACGCCGGCT ACGTGCACCC CGACGTGGTC
GCGGGCAACT TCAGCCGCCT CAAGGAGCTG TTCGCCTCCG GGCAGGTCCT GCTGCACCAG
GACGGCGTCG GCGCGTGGCA CGAGACCTTC GAGCAGCAAC GGCCGGTGAA CCCGGACTTC
CGGATGTCCG CCATCCTGCC GTTCGCCTCG GACGGCGGGA AGGCCACCTA CCCGATCAGC
AACCCGGTCT CCATGCTCAC CCTGTTCCGC AAGGACCTCT CCGACGACCG GGTCAAGGAG
CTGCTGCGGC TGTGCAACTT CGCCGCCGCG CCGTTCGGCA CCAGCGAGCA CTTCCTGCTG
CGCTACGGCA TCGACGGCAA GCACAGCACC CGCAACGCCG ACGGCTCGCC GCAGCTGAAC
GCCCTGGGAG CCAAGGAGAT CACCCTGACC TACGGGTTCA TCTCCGGCCC CGCCGAGGCG
TACGCGCACA CCCAGTTCCC GGACTTCGTG CGCGAGGCCC ACGCCTGGCA CGCGGACGCC
TACTCCAAGC AGGTCAAGCC GATCACGTTC GGCCTGCGCA TCGAGGAGCC GGCCGAGCTG
ACCAAGCTGG GCAAGCAGTT CGAGGACCGC ACCAACGACA TCCTGCGCGG GCGCGCCAGC
GCCAAGGACG CGGACGGCCT GGCCGAGGAG TGGCGCAAGG CGGGCGGCGA CAAGCTGCGC
GAGTTCTACG ACAAGGTCCT CACCGATGCC GGGCGCTGA
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| Protein sequence | MSAAAGGALL VGCGGPAPQQ GGGGGALNSE ELAKLLPAYS PVEYAKPDLP GVNGSKAGYL
KFPSTLVDAV KEKPLSGGEV TVMTPTFWPV PPGLGQNSYY DAVNERLGGT VKFELVAGAD
YAQKLAAMMA GKQVPELTVM PTFTVPPRFS AGVGEVFRDI GGLIAGDKAK DYPMLAGIPT
AVWENCVYNG KLFAVPFPGD LFAEATFYRP ELFESLGVDP RVKSFAELKD LCAKVNDPAG
NRWAVGDIFR TLVRARGDKG DWQRDSSGKV VNHIETPEYA AAIRDMRELF DAGYVHPDVV
AGNFSRLKEL FASGQVLLHQ DGVGAWHETF EQQRPVNPDF RMSAILPFAS DGGKATYPIS
NPVSMLTLFR KDLSDDRVKE LLRLCNFAAA PFGTSEHFLL RYGIDGKHST RNADGSPQLN
ALGAKEITLT YGFISGPAEA YAHTQFPDFV REAHAWHADA YSKQVKPITF GLRIEEPAEL
TKLGKQFEDR TNDILRGRAS AKDADGLAEE WRKAGGDKLR EFYDKVLTDA GR
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