| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2167 |
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| Symbol | |
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| ID | 8326356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2392660 |
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| End bp | 2395584 |
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| Gene Length | 2925 bp |
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| Protein Length | 974 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644942717 |
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| Product | glycoside hydrolase family 48 |
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| Protein accession | YP_003099958 |
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| Protein GI | 256376298 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.185965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTACC GCACCAGAGC GGGGAGGTCC CGGCCGCTCG CCCTGACCGC CGCCGCGGTC
GTCGTAGCCG GGATCGCGCC CGTAGTGGTC GCGCCGGTCG CCAGCGCCGC GGTGACCTGC
ACGGTCAACT ACCAGGTCAC CAACGAGTGG AGCACCGGGT TCGGCGCGAG CGTCGCCGTC
CGCAACCAGG GCGACGCGGT CGCCAACTGG CGCCTCACGT GGACCTTCCC CAGCGGCCAG
ACCGTGCAGC AGGGCTGGAA CGGCACGTTC ACCCAGTCGG GCAGCAAGGT CACCGTCGCC
GCCCCGACCT GGTCGCCGAA CCTGCCCAGC GGCGGCGAGG TCAGCGTCGG CTTCAACGGG
ACCAAGGGCG CCGCCAACGC CGCGCCCACG GACTTCGCCA TCAACGGCAC CCCGTGCACC
GGCCCCAACA CCGCCCCCAC GGTGAGCCTG ACCTCGCCCT CCTCCGGCGC GTCCTACGTG
ACCGGCGCGG CGATCCCGCT CGCCGCCACG GCGGCGGACT CGGACGGCAC GGTCGCCAAG
GTCGACTTCC TGGCCGACGG CGCCGTCGTG GCCACCGACA CCTCCGCCCC GTTCCAGGGC
TCCTGGACCG GCGCGAGCAC CGGCGACCAC ACCCTCACCG CCCGCGCCAC GGACAACAAG
GGCGCCACCG CCCTGTCCTC GCCGGTCGGC GTGAAGGTCC TGGCGGGGCA GGCGATCCTG
GCCAGCCCCA ACACGCTCAG CGTGAAGCAG GGGGCCACCG GCGCGTTCGG CGTCTCCCTG
GCCACCGCGC CCAGCGGCCC GGTCACCGTC GCGGTCGCCC GCTCCGCGGG CAGCACCGAC
CTCACGGCGG GCCCGGCGAC GCTGACCTTC ACCACCGCCA ACTGGTCGAC CAAGCAGAAC
GTCACGGTCA CCTCGGCGGA CAACGGCGGC GCGCTGGCCG AGGCCACGTT CACCGCCTCC
GCCACCGGCA TCACCCCGGC GTCCGTGGCG GTCAAGGAGA TCTCACCGTC CACGACGGAC
TTCGACCAGG CGTTCCTCGA CCAGTACGCC AAGATCCACG ACCCGTCCAG CGGCTACTTC
CGCGACTTCG GCGGCCTGAA GGTCCCCTAC CACTCGGTGG AGACCCTGCT CGTCGAGGCC
CCGGACCACG GCCACCAGAC GACCTCCGAG GCGTTCAGCT ACTACCTGTG GCTGGAGGCC
AGCTACGCCC GCATCACCGG TGACTGGACC TCGTTCAAGT CCGCGTGGGC GTCGATGGAG
AAGTTCGCCA TCCCGGCCAA GGCCGACCAG CCCACCAACG ACAAGTACAA CCCCTCGAAG
CCGGCCACCT ACGCGCCGGA GAACCCGAGG ATGGACCAGT ACCCGGCGCA GCTCGACGCC
AACATCCCCG TCGGCACGGA CCCGATCGCG GCCGAGCTGA AGTCCGCGTA CGGCACCGAC
GACATCTACG GGATGCACTG GCTGTTCGAC GTCGACAACA CCTACGGCTT CGGCCGCTGC
GGCGACGGCA CCGACACCGC GCCCGCGTAC ATCAACACCT ACCAGCGCGG CTCGTCCGAG
TCTGTGTGGG AGACCATCCC GCACTCCTCG TGCGACACGT TCAAGCACGG CGGCCCCAAC
GGGTTCCTCG ACCTGTTCAC CAAGGACGCC AGCTACGCCA AGCAGTGGAA GTACACCAAC
GCCCCCGACG CCGACGCGCG CGCGGTCCAG GTCGCGCTGC TGGCGCAGCA GTGGGCCACC
TCGCAGGGCA AGGCGGGCGA GATCTCCTCG GAGATCGGCA AGGCCGCCAA GATGGGCGAC
TACCTGCGGT ACGCCATGTT CGACAAGTAC TTCAAGAAGG TCGGCGGCTG CACCAGCCCG
TCCTGCCCGG CAGGCTCCGG CAAGGACTCC GCGCACTACT TGATGTCCTG GTACTACGCG
TGGGGCGGCG CGACCGACAC GTCCGCCGGG TGGGCCTGGC GGATCGGCGA CGGCGCCTCG
CACCAGGGCT ACCAGAACCC GCTCGCGGCC TACGCCCTGT CCCAGGTCGC CTCGCTCAAG
CCCAAGTCGG CCACCGGCCA GCAGGACTGG GCCAAGTCGA TGGACCGCCA GCTGGAGCTG
CTGCAGTGGC TCCAGTCGAC GGACGGCGGC ATCGCCGGTG GCGTCACGAA CTCGTGGGAG
GGCCACTACG GCGCGCCGCC CAGCGGCACC CCGACCTTCT ACGGCATGTT CTACGACGCC
CACCCGGTGT GGCGCGACCC GCCGTCGAAC CGCTGGTTCG GCTTCCAGGC GTGGCAGATG
GAGCGCACCG CCTCGCTCTA CCAGATGACC GGTGACGCCC GCGCCAAGAA GATCCTCGAC
AAGTGGGTCC CCTGGGCGCT GGCCAACACC ACCGTCGGCG CGAACGGCGC GTTCCAGATC
CCGTCCGACA TGGACTGGAC CGGCACGCCC GACACCTGGA ACCCGAGCAA CCCCAGCGGG
AACCCCGGCC TGCGGGTGAG CGTGCTCAAC CACAGCCAGG ACGTCGGCAT CGCCGCGTCG
CTCGCCAAGA CGCTGCTGAA CTACGCGGCC AAGTCCGGCA ACGCCGCCGC CCGCACCACG
GGCGAGGGCC TGCTGACCGC GCTGCTGTCC CACCAGGACG ACAAGGGCAT CGCGACCCCC
GAGTCCCGCG CGGACTACAA CCGGTTCGAC GACACCTACG ACTCGGCCTC CGGGTCCGGC
GTCTACGTGC CGCCGGGCTG GACCGGGAAG ATGCCCAACG GCGACACCAT CAACCAGAGC
TCCACGTTCC TGTCCATCCG CTCGATGTAC CGGGACGACC CCGACTGGCC CAAGGTGCAG
GCCTACCTGA ACGGTGGTTC CGCGCCGACC TTCGAGTACC ACAGGTTCTG GGCCCAGGCC
GAGATCGCGA CCGCGTTCTC GCTGCACTCG GAGCTGTTCG GCTAA
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| Protein sequence | MRYRTRAGRS RPLALTAAAV VVAGIAPVVV APVASAAVTC TVNYQVTNEW STGFGASVAV
RNQGDAVANW RLTWTFPSGQ TVQQGWNGTF TQSGSKVTVA APTWSPNLPS GGEVSVGFNG
TKGAANAAPT DFAINGTPCT GPNTAPTVSL TSPSSGASYV TGAAIPLAAT AADSDGTVAK
VDFLADGAVV ATDTSAPFQG SWTGASTGDH TLTARATDNK GATALSSPVG VKVLAGQAIL
ASPNTLSVKQ GATGAFGVSL ATAPSGPVTV AVARSAGSTD LTAGPATLTF TTANWSTKQN
VTVTSADNGG ALAEATFTAS ATGITPASVA VKEISPSTTD FDQAFLDQYA KIHDPSSGYF
RDFGGLKVPY HSVETLLVEA PDHGHQTTSE AFSYYLWLEA SYARITGDWT SFKSAWASME
KFAIPAKADQ PTNDKYNPSK PATYAPENPR MDQYPAQLDA NIPVGTDPIA AELKSAYGTD
DIYGMHWLFD VDNTYGFGRC GDGTDTAPAY INTYQRGSSE SVWETIPHSS CDTFKHGGPN
GFLDLFTKDA SYAKQWKYTN APDADARAVQ VALLAQQWAT SQGKAGEISS EIGKAAKMGD
YLRYAMFDKY FKKVGGCTSP SCPAGSGKDS AHYLMSWYYA WGGATDTSAG WAWRIGDGAS
HQGYQNPLAA YALSQVASLK PKSATGQQDW AKSMDRQLEL LQWLQSTDGG IAGGVTNSWE
GHYGAPPSGT PTFYGMFYDA HPVWRDPPSN RWFGFQAWQM ERTASLYQMT GDARAKKILD
KWVPWALANT TVGANGAFQI PSDMDWTGTP DTWNPSNPSG NPGLRVSVLN HSQDVGIAAS
LAKTLLNYAA KSGNAAARTT GEGLLTALLS HQDDKGIATP ESRADYNRFD DTYDSASGSG
VYVPPGWTGK MPNGDTINQS STFLSIRSMY RDDPDWPKVQ AYLNGGSAPT FEYHRFWAQA
EIATAFSLHS ELFG
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