Gene Amir_2167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2167 
Symbol 
ID8326356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2392660 
End bp2395584 
Gene Length2925 bp 
Protein Length974 aa 
Translation table11 
GC content70% 
IMG OID644942717 
Productglycoside hydrolase family 48 
Protein accessionYP_003099958 
Protein GI256376298 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.185965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTACC GCACCAGAGC GGGGAGGTCC CGGCCGCTCG CCCTGACCGC CGCCGCGGTC 
GTCGTAGCCG GGATCGCGCC CGTAGTGGTC GCGCCGGTCG CCAGCGCCGC GGTGACCTGC
ACGGTCAACT ACCAGGTCAC CAACGAGTGG AGCACCGGGT TCGGCGCGAG CGTCGCCGTC
CGCAACCAGG GCGACGCGGT CGCCAACTGG CGCCTCACGT GGACCTTCCC CAGCGGCCAG
ACCGTGCAGC AGGGCTGGAA CGGCACGTTC ACCCAGTCGG GCAGCAAGGT CACCGTCGCC
GCCCCGACCT GGTCGCCGAA CCTGCCCAGC GGCGGCGAGG TCAGCGTCGG CTTCAACGGG
ACCAAGGGCG CCGCCAACGC CGCGCCCACG GACTTCGCCA TCAACGGCAC CCCGTGCACC
GGCCCCAACA CCGCCCCCAC GGTGAGCCTG ACCTCGCCCT CCTCCGGCGC GTCCTACGTG
ACCGGCGCGG CGATCCCGCT CGCCGCCACG GCGGCGGACT CGGACGGCAC GGTCGCCAAG
GTCGACTTCC TGGCCGACGG CGCCGTCGTG GCCACCGACA CCTCCGCCCC GTTCCAGGGC
TCCTGGACCG GCGCGAGCAC CGGCGACCAC ACCCTCACCG CCCGCGCCAC GGACAACAAG
GGCGCCACCG CCCTGTCCTC GCCGGTCGGC GTGAAGGTCC TGGCGGGGCA GGCGATCCTG
GCCAGCCCCA ACACGCTCAG CGTGAAGCAG GGGGCCACCG GCGCGTTCGG CGTCTCCCTG
GCCACCGCGC CCAGCGGCCC GGTCACCGTC GCGGTCGCCC GCTCCGCGGG CAGCACCGAC
CTCACGGCGG GCCCGGCGAC GCTGACCTTC ACCACCGCCA ACTGGTCGAC CAAGCAGAAC
GTCACGGTCA CCTCGGCGGA CAACGGCGGC GCGCTGGCCG AGGCCACGTT CACCGCCTCC
GCCACCGGCA TCACCCCGGC GTCCGTGGCG GTCAAGGAGA TCTCACCGTC CACGACGGAC
TTCGACCAGG CGTTCCTCGA CCAGTACGCC AAGATCCACG ACCCGTCCAG CGGCTACTTC
CGCGACTTCG GCGGCCTGAA GGTCCCCTAC CACTCGGTGG AGACCCTGCT CGTCGAGGCC
CCGGACCACG GCCACCAGAC GACCTCCGAG GCGTTCAGCT ACTACCTGTG GCTGGAGGCC
AGCTACGCCC GCATCACCGG TGACTGGACC TCGTTCAAGT CCGCGTGGGC GTCGATGGAG
AAGTTCGCCA TCCCGGCCAA GGCCGACCAG CCCACCAACG ACAAGTACAA CCCCTCGAAG
CCGGCCACCT ACGCGCCGGA GAACCCGAGG ATGGACCAGT ACCCGGCGCA GCTCGACGCC
AACATCCCCG TCGGCACGGA CCCGATCGCG GCCGAGCTGA AGTCCGCGTA CGGCACCGAC
GACATCTACG GGATGCACTG GCTGTTCGAC GTCGACAACA CCTACGGCTT CGGCCGCTGC
GGCGACGGCA CCGACACCGC GCCCGCGTAC ATCAACACCT ACCAGCGCGG CTCGTCCGAG
TCTGTGTGGG AGACCATCCC GCACTCCTCG TGCGACACGT TCAAGCACGG CGGCCCCAAC
GGGTTCCTCG ACCTGTTCAC CAAGGACGCC AGCTACGCCA AGCAGTGGAA GTACACCAAC
GCCCCCGACG CCGACGCGCG CGCGGTCCAG GTCGCGCTGC TGGCGCAGCA GTGGGCCACC
TCGCAGGGCA AGGCGGGCGA GATCTCCTCG GAGATCGGCA AGGCCGCCAA GATGGGCGAC
TACCTGCGGT ACGCCATGTT CGACAAGTAC TTCAAGAAGG TCGGCGGCTG CACCAGCCCG
TCCTGCCCGG CAGGCTCCGG CAAGGACTCC GCGCACTACT TGATGTCCTG GTACTACGCG
TGGGGCGGCG CGACCGACAC GTCCGCCGGG TGGGCCTGGC GGATCGGCGA CGGCGCCTCG
CACCAGGGCT ACCAGAACCC GCTCGCGGCC TACGCCCTGT CCCAGGTCGC CTCGCTCAAG
CCCAAGTCGG CCACCGGCCA GCAGGACTGG GCCAAGTCGA TGGACCGCCA GCTGGAGCTG
CTGCAGTGGC TCCAGTCGAC GGACGGCGGC ATCGCCGGTG GCGTCACGAA CTCGTGGGAG
GGCCACTACG GCGCGCCGCC CAGCGGCACC CCGACCTTCT ACGGCATGTT CTACGACGCC
CACCCGGTGT GGCGCGACCC GCCGTCGAAC CGCTGGTTCG GCTTCCAGGC GTGGCAGATG
GAGCGCACCG CCTCGCTCTA CCAGATGACC GGTGACGCCC GCGCCAAGAA GATCCTCGAC
AAGTGGGTCC CCTGGGCGCT GGCCAACACC ACCGTCGGCG CGAACGGCGC GTTCCAGATC
CCGTCCGACA TGGACTGGAC CGGCACGCCC GACACCTGGA ACCCGAGCAA CCCCAGCGGG
AACCCCGGCC TGCGGGTGAG CGTGCTCAAC CACAGCCAGG ACGTCGGCAT CGCCGCGTCG
CTCGCCAAGA CGCTGCTGAA CTACGCGGCC AAGTCCGGCA ACGCCGCCGC CCGCACCACG
GGCGAGGGCC TGCTGACCGC GCTGCTGTCC CACCAGGACG ACAAGGGCAT CGCGACCCCC
GAGTCCCGCG CGGACTACAA CCGGTTCGAC GACACCTACG ACTCGGCCTC CGGGTCCGGC
GTCTACGTGC CGCCGGGCTG GACCGGGAAG ATGCCCAACG GCGACACCAT CAACCAGAGC
TCCACGTTCC TGTCCATCCG CTCGATGTAC CGGGACGACC CCGACTGGCC CAAGGTGCAG
GCCTACCTGA ACGGTGGTTC CGCGCCGACC TTCGAGTACC ACAGGTTCTG GGCCCAGGCC
GAGATCGCGA CCGCGTTCTC GCTGCACTCG GAGCTGTTCG GCTAA
 
Protein sequence
MRYRTRAGRS RPLALTAAAV VVAGIAPVVV APVASAAVTC TVNYQVTNEW STGFGASVAV 
RNQGDAVANW RLTWTFPSGQ TVQQGWNGTF TQSGSKVTVA APTWSPNLPS GGEVSVGFNG
TKGAANAAPT DFAINGTPCT GPNTAPTVSL TSPSSGASYV TGAAIPLAAT AADSDGTVAK
VDFLADGAVV ATDTSAPFQG SWTGASTGDH TLTARATDNK GATALSSPVG VKVLAGQAIL
ASPNTLSVKQ GATGAFGVSL ATAPSGPVTV AVARSAGSTD LTAGPATLTF TTANWSTKQN
VTVTSADNGG ALAEATFTAS ATGITPASVA VKEISPSTTD FDQAFLDQYA KIHDPSSGYF
RDFGGLKVPY HSVETLLVEA PDHGHQTTSE AFSYYLWLEA SYARITGDWT SFKSAWASME
KFAIPAKADQ PTNDKYNPSK PATYAPENPR MDQYPAQLDA NIPVGTDPIA AELKSAYGTD
DIYGMHWLFD VDNTYGFGRC GDGTDTAPAY INTYQRGSSE SVWETIPHSS CDTFKHGGPN
GFLDLFTKDA SYAKQWKYTN APDADARAVQ VALLAQQWAT SQGKAGEISS EIGKAAKMGD
YLRYAMFDKY FKKVGGCTSP SCPAGSGKDS AHYLMSWYYA WGGATDTSAG WAWRIGDGAS
HQGYQNPLAA YALSQVASLK PKSATGQQDW AKSMDRQLEL LQWLQSTDGG IAGGVTNSWE
GHYGAPPSGT PTFYGMFYDA HPVWRDPPSN RWFGFQAWQM ERTASLYQMT GDARAKKILD
KWVPWALANT TVGANGAFQI PSDMDWTGTP DTWNPSNPSG NPGLRVSVLN HSQDVGIAAS
LAKTLLNYAA KSGNAAARTT GEGLLTALLS HQDDKGIATP ESRADYNRFD DTYDSASGSG
VYVPPGWTGK MPNGDTINQS STFLSIRSMY RDDPDWPKVQ AYLNGGSAPT FEYHRFWAQA
EIATAFSLHS ELFG