Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2167 |
Symbol | |
ID | 8326356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2392660 |
End bp | 2395584 |
Gene Length | 2925 bp |
Protein Length | 974 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644942717 |
Product | glycoside hydrolase family 48 |
Protein accession | YP_003099958 |
Protein GI | 256376298 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.185965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGTACC GCACCAGAGC GGGGAGGTCC CGGCCGCTCG CCCTGACCGC CGCCGCGGTC GTCGTAGCCG GGATCGCGCC CGTAGTGGTC GCGCCGGTCG CCAGCGCCGC GGTGACCTGC ACGGTCAACT ACCAGGTCAC CAACGAGTGG AGCACCGGGT TCGGCGCGAG CGTCGCCGTC CGCAACCAGG GCGACGCGGT CGCCAACTGG CGCCTCACGT GGACCTTCCC CAGCGGCCAG ACCGTGCAGC AGGGCTGGAA CGGCACGTTC ACCCAGTCGG GCAGCAAGGT CACCGTCGCC GCCCCGACCT GGTCGCCGAA CCTGCCCAGC GGCGGCGAGG TCAGCGTCGG CTTCAACGGG ACCAAGGGCG CCGCCAACGC CGCGCCCACG GACTTCGCCA TCAACGGCAC CCCGTGCACC GGCCCCAACA CCGCCCCCAC GGTGAGCCTG ACCTCGCCCT CCTCCGGCGC GTCCTACGTG ACCGGCGCGG CGATCCCGCT CGCCGCCACG GCGGCGGACT CGGACGGCAC GGTCGCCAAG GTCGACTTCC TGGCCGACGG CGCCGTCGTG GCCACCGACA CCTCCGCCCC GTTCCAGGGC TCCTGGACCG GCGCGAGCAC CGGCGACCAC ACCCTCACCG CCCGCGCCAC GGACAACAAG GGCGCCACCG CCCTGTCCTC GCCGGTCGGC GTGAAGGTCC TGGCGGGGCA GGCGATCCTG GCCAGCCCCA ACACGCTCAG CGTGAAGCAG GGGGCCACCG GCGCGTTCGG CGTCTCCCTG GCCACCGCGC CCAGCGGCCC GGTCACCGTC GCGGTCGCCC GCTCCGCGGG CAGCACCGAC CTCACGGCGG GCCCGGCGAC GCTGACCTTC ACCACCGCCA ACTGGTCGAC CAAGCAGAAC GTCACGGTCA CCTCGGCGGA CAACGGCGGC GCGCTGGCCG AGGCCACGTT CACCGCCTCC GCCACCGGCA TCACCCCGGC GTCCGTGGCG GTCAAGGAGA TCTCACCGTC CACGACGGAC TTCGACCAGG CGTTCCTCGA CCAGTACGCC AAGATCCACG ACCCGTCCAG CGGCTACTTC CGCGACTTCG GCGGCCTGAA GGTCCCCTAC CACTCGGTGG AGACCCTGCT CGTCGAGGCC CCGGACCACG GCCACCAGAC GACCTCCGAG GCGTTCAGCT ACTACCTGTG GCTGGAGGCC AGCTACGCCC GCATCACCGG TGACTGGACC TCGTTCAAGT CCGCGTGGGC GTCGATGGAG AAGTTCGCCA TCCCGGCCAA GGCCGACCAG CCCACCAACG ACAAGTACAA CCCCTCGAAG CCGGCCACCT ACGCGCCGGA GAACCCGAGG ATGGACCAGT ACCCGGCGCA GCTCGACGCC AACATCCCCG TCGGCACGGA CCCGATCGCG GCCGAGCTGA AGTCCGCGTA CGGCACCGAC GACATCTACG GGATGCACTG GCTGTTCGAC GTCGACAACA CCTACGGCTT CGGCCGCTGC GGCGACGGCA CCGACACCGC GCCCGCGTAC ATCAACACCT ACCAGCGCGG CTCGTCCGAG TCTGTGTGGG AGACCATCCC GCACTCCTCG TGCGACACGT TCAAGCACGG CGGCCCCAAC GGGTTCCTCG ACCTGTTCAC CAAGGACGCC AGCTACGCCA AGCAGTGGAA GTACACCAAC GCCCCCGACG CCGACGCGCG CGCGGTCCAG GTCGCGCTGC TGGCGCAGCA GTGGGCCACC TCGCAGGGCA AGGCGGGCGA GATCTCCTCG GAGATCGGCA AGGCCGCCAA GATGGGCGAC TACCTGCGGT ACGCCATGTT CGACAAGTAC TTCAAGAAGG TCGGCGGCTG CACCAGCCCG TCCTGCCCGG CAGGCTCCGG CAAGGACTCC GCGCACTACT TGATGTCCTG GTACTACGCG TGGGGCGGCG CGACCGACAC GTCCGCCGGG TGGGCCTGGC GGATCGGCGA CGGCGCCTCG CACCAGGGCT ACCAGAACCC GCTCGCGGCC TACGCCCTGT CCCAGGTCGC CTCGCTCAAG CCCAAGTCGG CCACCGGCCA GCAGGACTGG GCCAAGTCGA TGGACCGCCA GCTGGAGCTG CTGCAGTGGC TCCAGTCGAC GGACGGCGGC ATCGCCGGTG GCGTCACGAA CTCGTGGGAG GGCCACTACG GCGCGCCGCC CAGCGGCACC CCGACCTTCT ACGGCATGTT CTACGACGCC CACCCGGTGT GGCGCGACCC GCCGTCGAAC CGCTGGTTCG GCTTCCAGGC GTGGCAGATG GAGCGCACCG CCTCGCTCTA CCAGATGACC GGTGACGCCC GCGCCAAGAA GATCCTCGAC AAGTGGGTCC CCTGGGCGCT GGCCAACACC ACCGTCGGCG CGAACGGCGC GTTCCAGATC CCGTCCGACA TGGACTGGAC CGGCACGCCC GACACCTGGA ACCCGAGCAA CCCCAGCGGG AACCCCGGCC TGCGGGTGAG CGTGCTCAAC CACAGCCAGG ACGTCGGCAT CGCCGCGTCG CTCGCCAAGA CGCTGCTGAA CTACGCGGCC AAGTCCGGCA ACGCCGCCGC CCGCACCACG GGCGAGGGCC TGCTGACCGC GCTGCTGTCC CACCAGGACG ACAAGGGCAT CGCGACCCCC GAGTCCCGCG CGGACTACAA CCGGTTCGAC GACACCTACG ACTCGGCCTC CGGGTCCGGC GTCTACGTGC CGCCGGGCTG GACCGGGAAG ATGCCCAACG GCGACACCAT CAACCAGAGC TCCACGTTCC TGTCCATCCG CTCGATGTAC CGGGACGACC CCGACTGGCC CAAGGTGCAG GCCTACCTGA ACGGTGGTTC CGCGCCGACC TTCGAGTACC ACAGGTTCTG GGCCCAGGCC GAGATCGCGA CCGCGTTCTC GCTGCACTCG GAGCTGTTCG GCTAA
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Protein sequence | MRYRTRAGRS RPLALTAAAV VVAGIAPVVV APVASAAVTC TVNYQVTNEW STGFGASVAV RNQGDAVANW RLTWTFPSGQ TVQQGWNGTF TQSGSKVTVA APTWSPNLPS GGEVSVGFNG TKGAANAAPT DFAINGTPCT GPNTAPTVSL TSPSSGASYV TGAAIPLAAT AADSDGTVAK VDFLADGAVV ATDTSAPFQG SWTGASTGDH TLTARATDNK GATALSSPVG VKVLAGQAIL ASPNTLSVKQ GATGAFGVSL ATAPSGPVTV AVARSAGSTD LTAGPATLTF TTANWSTKQN VTVTSADNGG ALAEATFTAS ATGITPASVA VKEISPSTTD FDQAFLDQYA KIHDPSSGYF RDFGGLKVPY HSVETLLVEA PDHGHQTTSE AFSYYLWLEA SYARITGDWT SFKSAWASME KFAIPAKADQ PTNDKYNPSK PATYAPENPR MDQYPAQLDA NIPVGTDPIA AELKSAYGTD DIYGMHWLFD VDNTYGFGRC GDGTDTAPAY INTYQRGSSE SVWETIPHSS CDTFKHGGPN GFLDLFTKDA SYAKQWKYTN APDADARAVQ VALLAQQWAT SQGKAGEISS EIGKAAKMGD YLRYAMFDKY FKKVGGCTSP SCPAGSGKDS AHYLMSWYYA WGGATDTSAG WAWRIGDGAS HQGYQNPLAA YALSQVASLK PKSATGQQDW AKSMDRQLEL LQWLQSTDGG IAGGVTNSWE GHYGAPPSGT PTFYGMFYDA HPVWRDPPSN RWFGFQAWQM ERTASLYQMT GDARAKKILD KWVPWALANT TVGANGAFQI PSDMDWTGTP DTWNPSNPSG NPGLRVSVLN HSQDVGIAAS LAKTLLNYAA KSGNAAARTT GEGLLTALLS HQDDKGIATP ESRADYNRFD DTYDSASGSG VYVPPGWTGK MPNGDTINQS STFLSIRSMY RDDPDWPKVQ AYLNGGSAPT FEYHRFWAQA EIATAFSLHS ELFG
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