Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2166 |
Symbol | |
ID | 8326355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2389972 |
End bp | 2391369 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644942716 |
Product | Cellulase |
Protein accession | YP_003099957 |
Protein GI | 256376297 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATCAA CGACCACGGC GCGCGGCAAC GGCGCCACGC CGTCGAAGTC CCGTCGCGGG AAGGTGGCAG CGGGAGCGCT GTCCAGCGCG CTGGTCGCCG CGGCCACCGC CATCGCCACG GGGACGGCTT CCCCCGCGGC GGTGGCGGCG GACTCGGAGT TCTACTCCGA CCCGGCGACC AGCGCGGCCA GGTGGGTGGC GGCGAACCCG AACGACAGCA GGGCCGCCGT CATCCGCGAC CGCGTCGCCT CGGTACCCCA GGCGAAGTGG TTCACCACGA CCAACACGTC CACGATCCGC GCCGAGGTGG ACGCCCACAC CTCGGCGGCG GCGTCGGCGG GCAAGACCCC GATCCTGGTG GTCTACAACA TCCCCAACCG CGACTGCGGC GGCGCGAGCG GCGGCGGCGC GCCCTCGCAC GGCGCCTACC GGCAGTGGGT CGACCAGTTC GCGGCGGGAC TCGCGGGCCG CCCGGCCGCG ATCATCCTCG AACCCGACGT CCTCCCGATC ATGAGCACCT GCCAGAGCGC GTCCCAGCAG GCCGAGACCC GCGCGTCGAT GGCCTACGCG GGCAAAGCGC TCAAGGCCGC GTCGAGCCAG GCGAAGGTGT ACTTCGACAT CGGCCACTCG GCCTGGCTGA CCCCGGCCGA GGCGGCGAAC CGCCTGCGCG CGGCGGAGGT CTCCACCAGC GCGGACGGCA TCGCGACCAA CGTCTCCAAC TACCGCCGCA CCGCCGACGA GGTGGCGTTC GCCAAGGCCA CCCTGAACGC GCTCGGCGAC GGCAGGCTCA AGGCCGTCGT CGACACCAGC CGCAACGGCA ACGGACCGCT CGGCAGCGAG TGGTGCGACC CGCCCGGCCG CGCGATCGGC ACGCCCAGCA CCAGGAACAC CGGCGACCCG CAGATCGACG CCTTCCTGTG GGTGAAGATC CCCGGCGAGG CGGACGGCTG CATCGCGGGC GCGGGCCAGT TCGTGCCGCA GCGCGCGTAC GACATGGCGG TGGCCGCAGG TCCCGCCCCG ACGACGACAA CGACGACCAC CACGACCACG CGCGTCACCA CGACCACCAC CACGCCCCCG CCGAACGGCG CGGCCTGCGT GGTGCGGCAC CGGGTGGTCA GCTCGTGGTC GGGCGGCCAC ACCGGCGAGG TGGTGATCGA GAACCGGGGT CCGGCGCTCC AGAACTGGAC CTTGGAGTTC TCCGCCCCCG GCGTGGCCGT CTCCCAGGGC TGGAACGGGA CGTGGACGGA CCTGGGCGAC ACCGTCCGGG TCACGAGCGC GTCCTGGAAC GGCGGGATCG CCACCGGTGG AACCGCGACC ACCGGCTACT CGGCGAGCTT CAGCGGCGGC ACGCCCCCGT TCACGTCTCC CGTGCTGAAC GGAACGGCCT GCGCCTGA
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Protein sequence | MRSTTTARGN GATPSKSRRG KVAAGALSSA LVAAATAIAT GTASPAAVAA DSEFYSDPAT SAARWVAANP NDSRAAVIRD RVASVPQAKW FTTTNTSTIR AEVDAHTSAA ASAGKTPILV VYNIPNRDCG GASGGGAPSH GAYRQWVDQF AAGLAGRPAA IILEPDVLPI MSTCQSASQQ AETRASMAYA GKALKAASSQ AKVYFDIGHS AWLTPAEAAN RLRAAEVSTS ADGIATNVSN YRRTADEVAF AKATLNALGD GRLKAVVDTS RNGNGPLGSE WCDPPGRAIG TPSTRNTGDP QIDAFLWVKI PGEADGCIAG AGQFVPQRAY DMAVAAGPAP TTTTTTTTTT RVTTTTTTPP PNGAACVVRH RVVSSWSGGH TGEVVIENRG PALQNWTLEF SAPGVAVSQG WNGTWTDLGD TVRVTSASWN GGIATGGTAT TGYSASFSGG TPPFTSPVLN GTACA
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