Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2161 |
Symbol | |
ID | 8326350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2385748 |
End bp | 2386737 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644942711 |
Product | virulence factor Mce family protein |
Protein accession | YP_003099952 |
Protein GI | 256376292 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.94845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGCCGT CGCGGTGGAC CGCCCTGGTG GCGGTGCTGG TGCTGCTCGC CGGGTGCTCG GGGATGCCCA GCGCCTACGA CCTGCCGCTG CCCGGCGGGG CGGACGTGGG GGACCGGCCG TACCGGGTGA CCGTCGAGTT CGACGACGTG CTCGACCTGG TGCCGCAGGC CGCGGTGAAG GTCGCCGACG TGCCGGTGGG GCGGGTGGAG GAGATCGGGC TGTCCGAGGA CGGGTCGGTC GCGCTGGTGC GGCTGCTGGT CAACGGGGAC GCGCGGCTGC CCGCCGACGC CAGGGGGCTG CTGCGGCAGT CCTCGCTGCT GGGGGAGAAG TACGTGGAGC TCGCGCCCGG CGACGGCGGG GCGGGCGACG GCGGTGCCGG TGGCGAGCTG GTGGACGGCG CGGTCGTGCC GGTGGCCCGC ACCAACCGCA ACCCCGAGGT GGAGGAGGTG CTCGGCGCGC TGTCCATGCT GCTCAACGGC GGCGGCATCG GGCAGGTCCA GGACATCTCC CGCGAGCTGG GCGCCGCCTT CGACGGCAAC ACCGGGCAGG CCCGCTCGCT GCTGTCCACG GTGGACGAGT TCGTGCGGCG GCTCGACGAG CGGCGCGCGG ACATCACGCG GGCCGTCGAC GGGCTGGCGC GGTTGTCCGA GGTGCTCGCG GCGCAGAAGC CCGGCATCGC CGAGGTCCTG GACGGTGTGG AACCCGGCCT GCGGGTGCTG GAGGAGCAGC GCGGTCAGCT CGTCGGGCTG CTCGGCGCGC TCGACCGGCT CTCCGGCGTC GCCGTCGACA CCGTGGAGCG GTCGCGCGAG GACCTCGTCG CCGACCTCGA GGCGCTCGAA CCGGTGCTGC GCGAGCTGGC CGAGGCCGGC CAGGACCTGC CCCGGTCGCT GGAGCTGCTG CTCACGTTCC CCTTCACCGA CGCGGTGCTC GACGGCGTCA AGGGCGACTA CCTCAACACC TACCTGGAGC TGAAGGGCGG TCCGAGGTGA
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Protein sequence | MRPSRWTALV AVLVLLAGCS GMPSAYDLPL PGGADVGDRP YRVTVEFDDV LDLVPQAAVK VADVPVGRVE EIGLSEDGSV ALVRLLVNGD ARLPADARGL LRQSSLLGEK YVELAPGDGG AGDGGAGGEL VDGAVVPVAR TNRNPEVEEV LGALSMLLNG GGIGQVQDIS RELGAAFDGN TGQARSLLST VDEFVRRLDE RRADITRAVD GLARLSEVLA AQKPGIAEVL DGVEPGLRVL EEQRGQLVGL LGALDRLSGV AVDTVERSRE DLVADLEALE PVLRELAEAG QDLPRSLELL LTFPFTDAVL DGVKGDYLNT YLELKGGPR
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