Gene Amir_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2161 
Symbol 
ID8326350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2385748 
End bp2386737 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content75% 
IMG OID644942711 
Productvirulence factor Mce family protein 
Protein accessionYP_003099952 
Protein GI256376292 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.94845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGCCGT CGCGGTGGAC CGCCCTGGTG GCGGTGCTGG TGCTGCTCGC CGGGTGCTCG 
GGGATGCCCA GCGCCTACGA CCTGCCGCTG CCCGGCGGGG CGGACGTGGG GGACCGGCCG
TACCGGGTGA CCGTCGAGTT CGACGACGTG CTCGACCTGG TGCCGCAGGC CGCGGTGAAG
GTCGCCGACG TGCCGGTGGG GCGGGTGGAG GAGATCGGGC TGTCCGAGGA CGGGTCGGTC
GCGCTGGTGC GGCTGCTGGT CAACGGGGAC GCGCGGCTGC CCGCCGACGC CAGGGGGCTG
CTGCGGCAGT CCTCGCTGCT GGGGGAGAAG TACGTGGAGC TCGCGCCCGG CGACGGCGGG
GCGGGCGACG GCGGTGCCGG TGGCGAGCTG GTGGACGGCG CGGTCGTGCC GGTGGCCCGC
ACCAACCGCA ACCCCGAGGT GGAGGAGGTG CTCGGCGCGC TGTCCATGCT GCTCAACGGC
GGCGGCATCG GGCAGGTCCA GGACATCTCC CGCGAGCTGG GCGCCGCCTT CGACGGCAAC
ACCGGGCAGG CCCGCTCGCT GCTGTCCACG GTGGACGAGT TCGTGCGGCG GCTCGACGAG
CGGCGCGCGG ACATCACGCG GGCCGTCGAC GGGCTGGCGC GGTTGTCCGA GGTGCTCGCG
GCGCAGAAGC CCGGCATCGC CGAGGTCCTG GACGGTGTGG AACCCGGCCT GCGGGTGCTG
GAGGAGCAGC GCGGTCAGCT CGTCGGGCTG CTCGGCGCGC TCGACCGGCT CTCCGGCGTC
GCCGTCGACA CCGTGGAGCG GTCGCGCGAG GACCTCGTCG CCGACCTCGA GGCGCTCGAA
CCGGTGCTGC GCGAGCTGGC CGAGGCCGGC CAGGACCTGC CCCGGTCGCT GGAGCTGCTG
CTCACGTTCC CCTTCACCGA CGCGGTGCTC GACGGCGTCA AGGGCGACTA CCTCAACACC
TACCTGGAGC TGAAGGGCGG TCCGAGGTGA
 
Protein sequence
MRPSRWTALV AVLVLLAGCS GMPSAYDLPL PGGADVGDRP YRVTVEFDDV LDLVPQAAVK 
VADVPVGRVE EIGLSEDGSV ALVRLLVNGD ARLPADARGL LRQSSLLGEK YVELAPGDGG
AGDGGAGGEL VDGAVVPVAR TNRNPEVEEV LGALSMLLNG GGIGQVQDIS RELGAAFDGN
TGQARSLLST VDEFVRRLDE RRADITRAVD GLARLSEVLA AQKPGIAEVL DGVEPGLRVL
EEQRGQLVGL LGALDRLSGV AVDTVERSRE DLVADLEALE PVLRELAEAG QDLPRSLELL
LTFPFTDAVL DGVKGDYLNT YLELKGGPR