Gene Amir_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2159 
Symbol 
ID8326348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp2383782 
End bp2384747 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content75% 
IMG OID644942709 
Productvirulence factor Mce family protein 
Protein accessionYP_003099950 
Protein GI256376290 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0878447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGCA GACCGGCGCT GATCGGGGCC TTCGGGCTCG TCGCGCTCGT CGTCGCCGTC 
GCCCTCGCGC TCGGGCTGGA CGCCGTCCCG CTGACCTCGG GCACCCGCTA CCGCGCCGAG 
TTCGCCGAGG CCGCCGGGCT CGAACCCGAC GACGAGGTCC GGGTGTCCGG CATGAAGGTC 
GGCGAGGTGA CCCGCGTCGA GCTGCGCGGC GACCGGGTGC TCGTGGAGTT CCGGGTGCGC 
GGGCCGGCCG TCGGCGACCG CAGCACCGCC GACATCCGCA TCAAGACGTT GCTGGGGCAG 
AAGTTCCTGG CCCTGGACAG CGCGGGGGGC GACCCGCTCG ACCCGGACAC GCCCATCCCG 
CTGGAGCGCA CCACCTCGCC CTACGACGTG GTCGACGCGT TCAACGGGCT CGCGGGCACC 
CTCGGCGGCC TGGACGCCGA GCAGCTCGCG GAGAGCTTCC GGGTCCTGTC CGACTCGTTC 
CGCGACACCC CCGAGCACGT CCGGGGCGCG CTGGACGGCC TGACCTCGTT GTCCCGCACC 
ATCTCCACCC GCGACCAGGA GCTGCGCACC CTGCTCGACG GGACCGAGGA GGTCAGCGGG 
GCGCTCGCCG AGCGGGCCGA CGACGTCACC GCGATCGTCG AGGACGGCAA CCGGCTGCTC 
GCCGAGATCA ACCGGCGGCG CGCCGCCATC AGCGGCCTGC TGGACGGGGC CCGCGAGCTC 
TCCCGCCAGC TGAGCGGACT GGTGGCGGAC AACGACGAGC GGCTGCGGCC CGCGCTGGAG 
CAGGTCGAGC GGGTCACCGA CCTGCTGCGC CGCGAGCAGG CCGCGTTCGA GCGCGGCCTC 
TCCCTGGCCG GGCCGTACTA CCGGCTGCTG TCCGACGCGA CGGGGACCGG GCCGTGGGTG 
GACACCTACG TGTGCGGGCT GGTCGTCACC ACCGAGCGGC GCGACTGCCC CACCGGGGGG 
CGCTGA
 
Protein sequence
MTRRPALIGA FGLVALVVAV ALALGLDAVP LTSGTRYRAE FAEAAGLEPD DEVRVSGMKV 
GEVTRVELRG DRVLVEFRVR GPAVGDRSTA DIRIKTLLGQ KFLALDSAGG DPLDPDTPIP 
LERTTSPYDV VDAFNGLAGT LGGLDAEQLA ESFRVLSDSF RDTPEHVRGA LDGLTSLSRT 
ISTRDQELRT LLDGTEEVSG ALAERADDVT AIVEDGNRLL AEINRRRAAI SGLLDGAREL 
SRQLSGLVAD NDERLRPALE QVERVTDLLR REQAAFERGL SLAGPYYRLL SDATGTGPWV 
DTYVCGLVVT TERRDCPTGG R