| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2157 |
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| Symbol | |
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| ID | 8326346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2381678 |
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| End bp | 2382757 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644942707 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_003099948 |
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| Protein GI | 256376288 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00120827 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGAGCA GGCAGCGCTT GGCGGGATTG CTCTTCGCGG TGCTGCTGCT CGGGATCTGC
GCGCTTTCCA CCGCCGTGTA CCTGGGCGTC TTCCGGGGCG AGGCCCCGGT GCTGCTGCGC
ACCGACCGGG TCGGCAACCA GCTCCAGGTG GGCTCCGAGG TGAAGCTGCT CGGCGTGCCG
ATCGGGCGGG TGCGCGCGGT GCGGGCCACC GGGGACGGGG CCGAGATCGA GCTGGGGATC
GACCCCGGGC AGGTCGGACT GGTGCCGGGG AACACCACGG CGCGGCTCCT GCCGAAGACG
CTGTTCGGCG AGCGGTACGT GAGCTTGGAG GCCCCCGCGC GGCCGAGCGG GGCGCTGGCG
GCCGGGGACG TCATCGACCA GGACCGCAGC GGCGCGGCGG TGGAGCTGGA GCGGGTGCTG
GCGGACCTGA TGCCCACGTT GCAGGCGGTG CGGCCGGACA AGCTGTCGGC CGCGCTCACC
TCGATCGCGA GAGCGCTGCG GGGGCGGGGG GAGGACCTGG GGGACACCGT GGTGGAGCTG
GACGAGCACC TGCGGGCGTT CACCCCCGAC CTGCCCGCGC TCACCGAGGA CCTGGGCAAG
CTCGCGGGGG TGGCCGAGGT GTACGCGGGG GCGGGGGACG ACCTGGTGTC CGCGCTGGCC
GACATCACCA CGACCAGCCG CACCCTCGCC CGCCAGCGCG CGGACCTGGC CGCGCTGCAC
CGGAACCTGA CCACGGCGGC CGACGACCTC ACCGCGTTCG TCTCCGCCAA CTCCGGCAAC
CTGGTGGCGC TCGCGGGCAG TGCCAGACCG AGCCTGGAGC TGTTCGCGGA GCACGCCCCG
GGCTACCGCT GCGTCCTGCG GGCCGTGGAC CAGCTCCGGC CCGCCGTCGA CCAGGCGTTG
GGGAAGGGCG GCGACCAGCC CGGCCTGCAC GGGGAGCTGG TGGTGGTTCC GGGGCGCGGG
GGGCGCGATC CGGGGCCGGA CGCGCCCGGA CACCCCTGTC CGCAGGGGCC CGCGAACGCG
GTCGCGCCCG GTGACGTGCC GGGCTGGGCG GGGCTGCTGC TCGGCTCGGG GGTGCGCTGA
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| Protein sequence | MRSRQRLAGL LFAVLLLGIC ALSTAVYLGV FRGEAPVLLR TDRVGNQLQV GSEVKLLGVP
IGRVRAVRAT GDGAEIELGI DPGQVGLVPG NTTARLLPKT LFGERYVSLE APARPSGALA
AGDVIDQDRS GAAVELERVL ADLMPTLQAV RPDKLSAALT SIARALRGRG EDLGDTVVEL
DEHLRAFTPD LPALTEDLGK LAGVAEVYAG AGDDLVSALA DITTTSRTLA RQRADLAALH
RNLTTAADDL TAFVSANSGN LVALAGSARP SLELFAEHAP GYRCVLRAVD QLRPAVDQAL
GKGGDQPGLH GELVVVPGRG GRDPGPDAPG HPCPQGPANA VAPGDVPGWA GLLLGSGVR
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