| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2149 |
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| Symbol | |
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| ID | 8326338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 2373734 |
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| End bp | 2374621 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644942699 |
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| Product | TRAP transporter solute receptor, TAXI family |
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| Protein accession | YP_003099940 |
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| Protein GI | 256376280 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0737588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCACCC GCCGCACCGC CCTGCTGGCC TGCGCCCTGG CCCCGCTGCT GGTCACCTGC
GCCCCGAGCG CCCCACCCAC CCTGGCGGTG ATCGCCGCGG GCGAGGAGGG CGGCTTCTAC
CTCGACTTCG CCACCCTCCT GGCCGCCCAG CTCCCGTTCC CCGCGACCCC ACGCGCCACG
GAGGGCAGCC GCGACAACCT CCACCTCCTG GCCACCGACC AAGCCGCCCT GGCCCTGACC
CTCGCCGACG CCGCCCAGGA GGCGCGGGAC CTGCGCGCGC TGGGCCGCGT CTACGAGAAC
TACCTCCAAC TGGTGGTCCC AGCCGACTCC CCGGCCCGCA CCGCGAGCGA CCTGCGTGGC
CTTCGGGTGT CGCTGGGCGC CCCTGGCTCG GGTGCCGCGC TGGCGGGCGC CCGCCTGTTC
ACCGCCCTCG ACCTGCACCG CGACACCCGC GTGGACCACC TGCCGTTCCG CACCGCCGCG
CGCGAGCTGG CCGAGGGCCG GATCGACGCG CTGCTGTGGT CGGGCGGCGT CCCCACGCCC
GTGCTCGCCG ACCTGGGCGG CGTCCGCCTG CTCCCCCTGG CCGACGCCCT CCCCGCGCTG
CGCGCGCTGG GCGGCGACCA CTACGAGCAG GTCACCGTCC CGGCGGGCGT CTACGGCGCG
GCGGCCGAGG TGCGCACGAT CGGCGTGGCG AACCTGCTGG TGTGCCGCCC CGACCTGCCG
GACGCCACCG CCGACGCGAC CGCGCGCACC CTCGTGGGCC GGGCCGCGTC ACTGGTGCCC
GGCCAGGCGC TGGGCGCGCA GTTCCTGGAC GTGCGCAGCC TGATCACCAC CACCGGCGTC
CCCCTGCACC CCGGCGCGGC GAGCGCGTAC CGCGACCTGC ACGGCTGA
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| Protein sequence | MTTRRTALLA CALAPLLVTC APSAPPTLAV IAAGEEGGFY LDFATLLAAQ LPFPATPRAT
EGSRDNLHLL ATDQAALALT LADAAQEARD LRALGRVYEN YLQLVVPADS PARTASDLRG
LRVSLGAPGS GAALAGARLF TALDLHRDTR VDHLPFRTAA RELAEGRIDA LLWSGGVPTP
VLADLGGVRL LPLADALPAL RALGGDHYEQ VTVPAGVYGA AAEVRTIGVA NLLVCRPDLP
DATADATART LVGRAASLVP GQALGAQFLD VRSLITTTGV PLHPGAASAY RDLHG
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