Gene Amir_2130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2130 
Symbol 
ID8326319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2354869 
End bp2355252 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content74% 
IMG OID644942680 
ProductPeptidoglycan-binding domain 1 protein 
Protein accessionYP_003099921 
Protein GI256376261 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.359514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACGAG GGGTGCCTGC GCTGCTCGTG GTGCTGTGCG CGGCGTTGTT CGGCGTGGGG 
ACGGCGGGCG GGGCGGCTGC GTCCGCTCGG GTCGCGGAGG TCGACTGCCC GCCGGGGCAC
CTGGTGCCGA ACCCCGGTCC GGGGCAACCG AATCCGGTCG TCCGCAGGGG GCAGTGCCTG
CTGAACCTGG TCCTCCGCCC GCCGGAGTAC GAGCCGCTCC CGGTGGACGG GATCTCCGGG
CCGGAGACCA CCCGGAGGCT GGTCCGGTTC CAGCAGTGCG CGAACGCGCT CGGCGCGGGG
CTCGTGGTGG ACGGCCGCTT CGGGATGGCC ACGATGCTCC ACCTGCTGTG GTGGGCCGAG
CACCCCGAGG ACTTCGCCTG CTGA
 
Protein sequence
MGRGVPALLV VLCAALFGVG TAGGAAASAR VAEVDCPPGH LVPNPGPGQP NPVVRRGQCL 
LNLVLRPPEY EPLPVDGISG PETTRRLVRF QQCANALGAG LVVDGRFGMA TMLHLLWWAE
HPEDFAC