Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2120 |
Symbol | |
ID | 8326309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2345948 |
End bp | 2346544 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644942670 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003099911 |
Protein GI | 256376251 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCAGGG TGAGTCAGGA CCACCTAGAC GCCCGCCGCC GCCAGATCCT GGACGGCTCG CGTGCCTGCT TCGCGCGCTT CGGCTACGAG GGCGCCACCG TGCGCCGCCT CGAAGAGGGT ACCGGCCTGT CCAGGGGAGC GATCTTCCAC CACTTCCGGG ACAAGGAGTC GCTGTTCCTG GCGCTGGCCG AGGACGACGC GATCCGCATG GCCGAGGTGG TGGCCGAGCA GGGCCTGGTC CAGGTGATGC GAGAACTGCT CGCAACCCCG CGCCACGATG ATGGCGAGCA GCACCCGGCG GACTGGCTGG GCACCCGCCT GGAGGTGTCA CGGCGACTGC GCACGGACCC TGAGTTCCGC GGGCGCTGGG CGGAGCGCTC CAGCCAGCTC ACCGACGCGA CCAGGCAGCG CCTCCAGCGC CAGCGCGAGG CGGGCAACCT CCGCGACGAC GTGGACGTGG CCGTCCTGAC GTCGTTCCTG GAGCTGGTCC TGGAAGGCCT GGTCTCCCAC CTGGCCATGG GCCTCCCCGC AGACGACCTG GAACCGGTCC TCGACCTGGT GGAGGAGTCC GTCCGCCGCC ACCGCCGCAC AGGCTGA
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Protein sequence | MPRVSQDHLD ARRRQILDGS RACFARFGYE GATVRRLEEG TGLSRGAIFH HFRDKESLFL ALAEDDAIRM AEVVAEQGLV QVMRELLATP RHDDGEQHPA DWLGTRLEVS RRLRTDPEFR GRWAERSSQL TDATRQRLQR QREAGNLRDD VDVAVLTSFL ELVLEGLVSH LAMGLPADDL EPVLDLVEES VRRHRRTG
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