Gene Amir_2094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2094 
Symbol 
ID8326283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2316210 
End bp2317337 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content75% 
IMG OID644942644 
ProductPhosphatidylinositol alpha-mannosyltransferase 
Protein accessionYP_003099885 
Protein GI256376225 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0705287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGGTCG GCATCGTCTG CCCGTACTCG TTCGACGTGC CCGGCGGCGT GCAGGCGCAC 
GTGGTCGACC TGGCCAGGGC GCTGCGCGGG CTCGGCCACG ACGTCGACGT GCTCGCGCCC
GCCGACGACG ACACGCCCCT CCCGGAGTTC GTCACCCCGG CCGGGCGGGC CGTCGGCATC
CCCTACAACG GGTCGGTGGC GCGGCTGTCG TTCGGGCCGG TGTCGTACGC GCGGGTGCGG
CGGTGGATCG CCGAGCACGA CTTCGACGTG CTGCACCTGC ACGAGCCGAC CGCGCCGTCG
CTGGCCATGC TGGCGCTGAT GGTCGCGGAC GGGCCGATCG TGGCGACCTT CCACACCTCC
ACGCCCCGCT CCAAGATGCT GTCCGCGTTC CAGGGGGTGC TCCAGCCGTT CCTGGAGAAG
GTCACCGCCC GGATCGCGGT GTCCGCGCTG GCCAGGCGGG TGCAGGTCGA GCACCTGGGC
GGCGACGCGG TGGAGATCCC GAACGGCGTC GACGTGGACT TCTTCGCCGA CGCGACCCCG
CTCGACGGCT ACCCCCGCCC CGGCGGCACG ATCGGGTTCG TCGGCCGCTA CAGCGAGCCC
CGCAAGGGGA TGCCGGTGCT GCTGGAGGCG GTGCGCGGGC TGGACCTGCC GGACGTGCGG
CTGCTCGTGG TCGGCCGGGG CGACGAGGCG GCGCTGCGCG CCCAGGCCGG GCCGGAGCTG
GCCGGCCGGA TCGACTTCCT CGGCATGGTC GACGACGAGA CGAAGGCGCG GGCGCTGCGC
AGCGTCGACG TGTACTGCGC GCCGAACACC GGCGGCGAGA GCTTCGGGAT CATCCTGACC
GAGGCGATGT CGGCGGGCGC GGTGGTCGCG GCGAGCGACC TGGACGCGTT CCGCCGGGTG
CTGGACGACG GCGCGGCGGG CGTGCTCACC CCGGTGGGCG ACGCGGTGGC GCTGCGCGGG
GCGCTGCGCG ACCTGCTCGC CGACCCGGAC CGGCGCGCGG ACTACGCGGC GGCCGGGCGG
GCGCGGGTGC AGACGTTCGA CTGGTCCGTG GTGGCCGCGC AGGTGCTGCG GGTGTACGAG
AGCGCGGTGG CCGCCAACCC GAGGCGGGTC GCGGAGGCCG GTCGGTGA
 
Protein sequence
MRVGIVCPYS FDVPGGVQAH VVDLARALRG LGHDVDVLAP ADDDTPLPEF VTPAGRAVGI 
PYNGSVARLS FGPVSYARVR RWIAEHDFDV LHLHEPTAPS LAMLALMVAD GPIVATFHTS
TPRSKMLSAF QGVLQPFLEK VTARIAVSAL ARRVQVEHLG GDAVEIPNGV DVDFFADATP
LDGYPRPGGT IGFVGRYSEP RKGMPVLLEA VRGLDLPDVR LLVVGRGDEA ALRAQAGPEL
AGRIDFLGMV DDETKARALR SVDVYCAPNT GGESFGIILT EAMSAGAVVA ASDLDAFRRV
LDDGAAGVLT PVGDAVALRG ALRDLLADPD RRADYAAAGR ARVQTFDWSV VAAQVLRVYE
SAVAANPRRV AEAGR