Gene Amir_2085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2085 
Symbol 
ID8326274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2307658 
End bp2308614 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content76% 
IMG OID644942636 
Productdaunorubicin resistance ABC transporter ATPase subunit 
Protein accessionYP_003099877 
Protein GI256376217 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.198089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGACC CGGCCATCAG AACCACCGGA CTGCGCAAGC GGTTCGGCGA CCACACCGTG 
CTCGACGGGC TCGACCTCAC CGTCGAGCGG GGGACCGTCC ACGCGCTGCT CGGCCAGAAC
GGCGCGGGCA AGACCACCAC CGTCAAGATC CTCTCCACGC TCCTGCGCCC CGACTCCGGC
CGCGCCACCG TCGCGGGCCG CGACCTCGCC GACGACCCGG CCGGGGTGCG CGCCGCGATC
GGCGTCACCG GCCAGTTCTC CGCCGTGGAC AACCTCCTCA CCGCCGAGGA GAACCTGCGC
CTCATGGCCG ACCTGCGGCA CCTCACCCGC CCCGAGGGCC GCCGCCGCGC CTCGGAGCTG
CTGGAGCGCC TGGACCTCAC CGCGTCGGCC CGCAAGCCCG CGTCCACCCT CTCCGGCGGC
CAGCGCCGCA GGCTCGACCT GGCCATGACC CTGGTCGGCG CCCCCGAGGT GATCTTCCTG
GACGAGCCGA CGACGGGCCT CGACCCGAGC GGCAGGCGCG AGGTGTGGCG GATCGTGCGC
GAGCTGGTCG CCGAGGGCAC GACCGTCCTG CTCACCACCC AGCACCTGGA GGAGGCCGAC
CAGCTCGCGC ACCGCGTCGC CCTGCTGCAC GACGGCTCCC TCGCCGCCGA GGGCACGCCC
GAGCAGCTCA AGCGCCGCGT CCCCGGCGCG CACGTCCGCC TGCGCCTGCC CGACCGCGCC
GCGCTGGCCG CAGCCACCCG CGCGCTCGGC CCCGCCGCCC TGCTCGAGGA ACCCCAAGCG
GCGCAAGCGG AACCGGTGCT GCGCGTCGCG GGCGACGGCA CGCCGCAGTC GCTGCGCGCC
CTGCTCGACC GGCTCGACGA GCACGCCGTG GACGTCACCG AGCTGTCCGT GCGCACCCCC
GACCTGGACG ACGTGTTCCT CGCGCTGACG GGGCACGGGA AGGCGAGCAC CCGATGA
 
Protein sequence
MNDPAIRTTG LRKRFGDHTV LDGLDLTVER GTVHALLGQN GAGKTTTVKI LSTLLRPDSG 
RATVAGRDLA DDPAGVRAAI GVTGQFSAVD NLLTAEENLR LMADLRHLTR PEGRRRASEL
LERLDLTASA RKPASTLSGG QRRRLDLAMT LVGAPEVIFL DEPTTGLDPS GRREVWRIVR
ELVAEGTTVL LTTQHLEEAD QLAHRVALLH DGSLAAEGTP EQLKRRVPGA HVRLRLPDRA
ALAAATRALG PAALLEEPQA AQAEPVLRVA GDGTPQSLRA LLDRLDEHAV DVTELSVRTP
DLDDVFLALT GHGKASTR