| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2071 |
|---|
| Symbol | |
|---|
| ID | 8326260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 2294631 |
|---|
| End bp | 2295752 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644942622 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003099863 |
|---|
| Protein GI | 256376203 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03429] aromatic prenyltransferase, DMATS type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCAGTC GCCCTGCTGT GGTTCACGCC TCACGTCGTA CGGCCTTGTA CGAGGTGGCG
GGAACCGCAT ATCGTGACTT CGCGGCCCAG CAGTGGGTGG CCGCCTGCGC AGCGCTGGAT
TTTCCGTTCA GCGAGTTGTA CAGGACCCTC CACGAGCTCG ATTCGGTGCT CGGGCAATGG
GCCGACGCGC CCATCGGCGA AGTCCCCCGA TATCCGTCGT TCGTTTCCCG CGACGGTTTT
CCCCTGGAGT TCTCGGTGAG CTGGCGCGGC GGCGTCGGCG AGGCCAGGGT GCTCTTCGAG
TCCCTCGGGG CCGAGCCCAC CGCCAGGGGC GCCCAGGAGG CCGGACGCGC CCTCACCAGG
GCGCTGGGCG CGCTGCCGGG CGTCTCCCTG GACCGCTACC TGCGGATCGA GGACCTGTAC
GTCACCGACG AGCCGGCCCC GTACCGGCCC GCCGTCTGGC ACTCCCTGGC GCACCGCAGG
GGCGGGGCGA GCCGCTACAA GGTCTACCTG AACCCGCAGA CCAGGGGCGT GGACCGGGCG
CACGCGGTGA TGCGCGAGAC CATGCGCAGG CTCGGCCTGG AACGGGCCTG GGACCACGTC
GAGCGCGCGG GCCTCGACCC CCGCCGGGAC GTGCTGGAGT TCGTCGCGCT CGACCTGGAC
GACCGGGCCG AGGCCAGGGT CAAGGTCTAC TACCGCCACC TCGGCGAGGT CGACCTCGAC
CGCGTCGCCT CGCTCGCCCG CAGGCACGAC CCGGCGCTCG CCGCCCCGGT CTACCGGGCC
GTGTACGGCG ACGACGTCCC GGTCAACGAG CCCATGACCT GCCTGGCGTT CCGCGAGGGC
CTCGACGTCC CCGACGAGGC CAACCTGTAC CTGCGCCTGC CCAGCGTGGT CGCCTCGGAC
GCGGAGGCCG CCGACCGGGT CGCCGCCGCG ATGCGCCTGT GCGGCCTGGA CCCCCGGCCC
CACCACGAGG TCGCGTCCGC GCTCGCGCCG CTGCCGCTGG ACTCGGTGGT CGGGCTGCAC
GAGCTGCTCA GCTTCCGCAC CTCCTCGGGC GCCAGGCCCG ACCTGGGCGT GTACTTCCGG
TTCGGCGTCT ACGACTCGTC CGTGGACGGC ACCCACGCCT GA
|
|---|
| Protein sequence | MSSRPAVVHA SRRTALYEVA GTAYRDFAAQ QWVAACAALD FPFSELYRTL HELDSVLGQW
ADAPIGEVPR YPSFVSRDGF PLEFSVSWRG GVGEARVLFE SLGAEPTARG AQEAGRALTR
ALGALPGVSL DRYLRIEDLY VTDEPAPYRP AVWHSLAHRR GGASRYKVYL NPQTRGVDRA
HAVMRETMRR LGLERAWDHV ERAGLDPRRD VLEFVALDLD DRAEARVKVY YRHLGEVDLD
RVASLARRHD PALAAPVYRA VYGDDVPVNE PMTCLAFREG LDVPDEANLY LRLPSVVASD
AEAADRVAAA MRLCGLDPRP HHEVASALAP LPLDSVVGLH ELLSFRTSSG ARPDLGVYFR
FGVYDSSVDG THA
|
|---|
| |