Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2051 |
Symbol | |
ID | 8326240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2275100 |
End bp | 2276212 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644942602 |
Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
Protein accession | YP_003099843 |
Protein GI | 256376183 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCAGTG ACATCGAACT CGTGGACGTG ACCAAGCGGT ACGGCGGCAC GAAGCGCGCC GCCGTCGACT CGGTGAGCAT GACCATCCCC GCCGGGGAGA TCGTGGTGTT CGTCGGCCCC TCGGGCTGTG GCAAGACCAC CACCATGCGG ATGATCAACC GGCTGATCGA GCCGACCTCC GGCAAGATCA CCATCGACGG CGCGGACACC CGCTCGCTGG ACCCCGACGA GCTGCGTCGC GGCATCGGCT ACGCGATCCA GCAGGCCGGG CTGTTCCCGC ACATGACGGT CGCGCAGAAC GTCGGCACCG TGCCGGGCCT GCTGGGGTGG AGCAAGACCA AGGTCCGCGA CCGCGTCGAC GAGATGCTCG ACCTGGTGGG CCTCGACCCG GCCGACTACC GCGACCGCTT CCCCCGCCAG CTCTCCGGCG GCCAGCAGCA GCGCGTCGGC GTGGCCCGCG CGCTCGCCGC CGACCCGCCC GTGCTGCTGA TGGACGAGCC GTTCGGCGCG GTCGACCCGA TCACCCGCGG CAACCTGCAG GACCAGCTGC TGCGCCTGCA GTCCGAGCTG GGCAAGACGA TCGTGTTCGT CACGCACGAC TTCGACGAGG CGGTCAAGCT CGGCGACCGC ATCGCGGTGC TGGGCGAGCA GTCGAGGATC CTGCAGTACG ACACCCCGGA GGCGGTGCTG GCCAACCCGG CCGACGACAC CGTCGCGGGC TTCGTCGGCG CGGGCGCCTC GCTCAAGCAG CTGACCCTGC GCCGGGTGCG CGAGGTCGAG CTGGGCAGCG CGGTCACCGC CCCGCAGGAC GCCGACGCCA CCGAGATCCG CCGCAAGCTC GACGAGGCGG GCCGCGAGTT CGCGCTGCTG CTGGACGGCC GCAACCGCCC GGTCAGCTGG GTGCACGCGC GCAACCCGCG CAGCCGCAAG CCCGTCGGCG ACCTGGTGTC GCTCCAGTCG ACCCTGCAGG ACGCGCTGGA GGCGATCCTG ACCGAGGGCG GCGCGGCCGT GGTGACCGGC AAGCGCGGCG AGTACGTCGG CCTGGTCGAG ATCGACACCG TCATGGGCGC CGTGCAGCAG GCCCGCGACG ACCACGCGGG GGCTCCCGCG TGA
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Protein sequence | MASDIELVDV TKRYGGTKRA AVDSVSMTIP AGEIVVFVGP SGCGKTTTMR MINRLIEPTS GKITIDGADT RSLDPDELRR GIGYAIQQAG LFPHMTVAQN VGTVPGLLGW SKTKVRDRVD EMLDLVGLDP ADYRDRFPRQ LSGGQQQRVG VARALAADPP VLLMDEPFGA VDPITRGNLQ DQLLRLQSEL GKTIVFVTHD FDEAVKLGDR IAVLGEQSRI LQYDTPEAVL ANPADDTVAG FVGAGASLKQ LTLRRVREVE LGSAVTAPQD ADATEIRRKL DEAGREFALL LDGRNRPVSW VHARNPRSRK PVGDLVSLQS TLQDALEAIL TEGGAAVVTG KRGEYVGLVE IDTVMGAVQQ ARDDHAGAPA
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