Gene Amir_2051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2051 
Symbol 
ID8326240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2275100 
End bp2276212 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content72% 
IMG OID644942602 
Productglycine betaine/L-proline ABC transporter, ATPase subunit 
Protein accessionYP_003099843 
Protein GI256376183 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID[TIGR01186] glycine betaine/L-proline transport ATP binding subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCAGTG ACATCGAACT CGTGGACGTG ACCAAGCGGT ACGGCGGCAC GAAGCGCGCC 
GCCGTCGACT CGGTGAGCAT GACCATCCCC GCCGGGGAGA TCGTGGTGTT CGTCGGCCCC
TCGGGCTGTG GCAAGACCAC CACCATGCGG ATGATCAACC GGCTGATCGA GCCGACCTCC
GGCAAGATCA CCATCGACGG CGCGGACACC CGCTCGCTGG ACCCCGACGA GCTGCGTCGC
GGCATCGGCT ACGCGATCCA GCAGGCCGGG CTGTTCCCGC ACATGACGGT CGCGCAGAAC
GTCGGCACCG TGCCGGGCCT GCTGGGGTGG AGCAAGACCA AGGTCCGCGA CCGCGTCGAC
GAGATGCTCG ACCTGGTGGG CCTCGACCCG GCCGACTACC GCGACCGCTT CCCCCGCCAG
CTCTCCGGCG GCCAGCAGCA GCGCGTCGGC GTGGCCCGCG CGCTCGCCGC CGACCCGCCC
GTGCTGCTGA TGGACGAGCC GTTCGGCGCG GTCGACCCGA TCACCCGCGG CAACCTGCAG
GACCAGCTGC TGCGCCTGCA GTCCGAGCTG GGCAAGACGA TCGTGTTCGT CACGCACGAC
TTCGACGAGG CGGTCAAGCT CGGCGACCGC ATCGCGGTGC TGGGCGAGCA GTCGAGGATC
CTGCAGTACG ACACCCCGGA GGCGGTGCTG GCCAACCCGG CCGACGACAC CGTCGCGGGC
TTCGTCGGCG CGGGCGCCTC GCTCAAGCAG CTGACCCTGC GCCGGGTGCG CGAGGTCGAG
CTGGGCAGCG CGGTCACCGC CCCGCAGGAC GCCGACGCCA CCGAGATCCG CCGCAAGCTC
GACGAGGCGG GCCGCGAGTT CGCGCTGCTG CTGGACGGCC GCAACCGCCC GGTCAGCTGG
GTGCACGCGC GCAACCCGCG CAGCCGCAAG CCCGTCGGCG ACCTGGTGTC GCTCCAGTCG
ACCCTGCAGG ACGCGCTGGA GGCGATCCTG ACCGAGGGCG GCGCGGCCGT GGTGACCGGC
AAGCGCGGCG AGTACGTCGG CCTGGTCGAG ATCGACACCG TCATGGGCGC CGTGCAGCAG
GCCCGCGACG ACCACGCGGG GGCTCCCGCG TGA
 
Protein sequence
MASDIELVDV TKRYGGTKRA AVDSVSMTIP AGEIVVFVGP SGCGKTTTMR MINRLIEPTS 
GKITIDGADT RSLDPDELRR GIGYAIQQAG LFPHMTVAQN VGTVPGLLGW SKTKVRDRVD
EMLDLVGLDP ADYRDRFPRQ LSGGQQQRVG VARALAADPP VLLMDEPFGA VDPITRGNLQ
DQLLRLQSEL GKTIVFVTHD FDEAVKLGDR IAVLGEQSRI LQYDTPEAVL ANPADDTVAG
FVGAGASLKQ LTLRRVREVE LGSAVTAPQD ADATEIRRKL DEAGREFALL LDGRNRPVSW
VHARNPRSRK PVGDLVSLQS TLQDALEAIL TEGGAAVVTG KRGEYVGLVE IDTVMGAVQQ
ARDDHAGAPA