| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2040 |
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| Symbol | |
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| ID | 8326229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 2259642 |
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| End bp | 2263310 |
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| Gene Length | 3669 bp |
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| Protein Length | 1222 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644942591 |
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| Product | nitrate reductase, alpha subunit |
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| Protein accession | YP_003099832 |
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| Protein GI | 256376172 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGCA CAGGGGTGGA CCGCCCTCGA CCGCGCGGGC GCAAGTTCTT CGCGCGGGGG
GAGGTGTCGG CCGACGGCAG GACCGTGCAC CGGATCGACC AGGCGGAGTG GGAGCGCTTC
TACCGGGACA GGTGGGCCCA CGACAAGGTG GTCCGGTCCA CGCACGGGGT CAACTGCACC
GGTTCGTGCT CGTGGCAGGT GTTCGTCAAG GACGGCCTGA TCACGTGGGA GCACCAGGCG
ACGGACTACC CGTCGGTCGG GCCGGACTCG CCGGAGTACG AGCCGCGCGG CTGCCCGCGA
GGCGCCTCGT TCTCCTGGTA CACCTACTCC CCGTCACGGG TCCGCTACCC GTACGTGCGG
GGCGTGCTGC TCAAGATGTG GCGCGAGGCG AAGGCGCGCC TGGGCGATCC GGTTCTGGCC
TGGGCCGAGA TCACCGGTGA CCCGGAGAAG TCGCGCCGCT ACAAGCGGGC GCGCGGCAAG
GGCGGCCTGA TCCGCTCGAC GTGGGACGAG GTCAACGAGC TCGTCGCCGC CGCGCACGTG
CACACCGCGA AGGCGTACGG CCCGGACCGG GTGGTCGGCT TCTCGCCGAT CCCGGCGATG
TCGATGGCCT CGTTCGCGGC GGGCACCCGC TACCACTCGC TGATCGGCGG CACGCTGCTG
TCGTTCTACG ACTGGTACGC CGACCTGCCG ATCGCCTCGC CGCAGATCTG GGGCGACCAG
ACCGACGTGC CCGAGTCGGC GGACTGGTGG AACAGCGGCT ACCTGGTCAT GTGGGGCTCG
AACATCCCGG TGACCCGCAC GCCGGACGCG CACTTCCTCA CCGAGGCCCG GTACAAGGGC
ACGAAGGTCG TCGCGGTCAG CCCGGACTAC GCGGACAACG TGAAGTTCGC CGACGACTGG
CTGGCGCCGC ACCCCGGCAC GGACGGCGCG CTGGCGATGG CCATGGGCCA CGTGGTGCTG
ACCGAGTTCT TCCGCGACCG GCAGGTGCCG TACTTCTCGG AGTACACCCG CCGCTACACG
GACCTGCCCT TCCTGGTGCG CCTGGAGGAG CGCGGCGACG CGTTCGTGCC CGGCAAGTTC
CTCACCGCCG CCGACCTCGG CCAGGACGTG GAGAACGCCG AGTTCAAGAC GGTGCTGCTG
AACGAGGAGA CCGGCGAGGC CGTCGTGCCG CAGGGCTCCC TCGGGCACCG CTGGGGCGAG
CAGGGCGAGG GCAGGTGGAA CCTGGAGCTG GACGGCGTCA CGCCCGCGCT GACCCTGCAC
GGCGACAACG CGGCGCTGAC CACCGAGGCG GTGGCGATCG ACCTGCCGCG CTTCGACGTC
GGCGAGACCG AGGGCGGCGG CATCGTCCGC CGGGGCGTGC CCGCCACGCG CGTGAACGGG
ATGCTCGTCA CCACCGTCTT CGACCTGGTG ATGGCGCGCT ACGCGGTGGG CCGCGAGGGC
CTGCCCGGCG AGTGGCCGAA GTCCTATGAG GACACCGAGG CCCCGGGAAC CCCCGGCTGG
GCCGAGGAGA TCACCTCGGT GCCCGCCGCG ACGACCGCGC GCATCGCCCG CGAGTTCGCC
CGCAACGCCG AGCGCACCCA GGGCCGCTCG ATGATCGTGG TGGGCGCGGG CGCGAACCAC
TGGTTCCACT CGGACACCAT CTACCGGGCG TTCCTGTCGC TGGTGCTGCT CACCGGCTGC
CAGGGCCGCA ACGGCGGCGG CTGGGCGCAC TACGTGGGCC AGGAGAAGGC GCGCCCGGTC
ACCGGGATGC AGCACCTGGC GTTCGCGTTC GACTGGCAGC GGCCGACCAG GCACATGGCG
GGCACCGCGT TCTGGTACCT GGCAACGGAC CAGTGGCGCT ACGAGGGCTT CAAGGCCGAC
GAGCTGTCCA CCCCGCTGGG CACGGGCATG TTGCAGGGCA AGTCGTTCGC CGACTGCAAC
GCGCAGGCCG CCCGGCTGGG CTGGCTGCCC TCGCACCCCA CGTTCGACCG CAACCCGCTG
GACCTGGCCG ACGAGGCGAA GGACGCGGGC GTCCCGGTGG CCGACCACGT GGTGTCGGAG
CTGAAGGCGG GCAGGCTGAA CTTCGCGGCG GAGGACCCAG ACAACCCGGC GAACTTCCCG
CGCGCGCTGA CCGTGTGGCG TGCGAACCTG CTCGGCTCCT CGGGCAAGGG CAACGAGTAC
TTCCTGCGGC ACCTGCTGGG CGCCGACGCG CAGGTGCGCG GCGCCGAGAC GGCGGAGGGG
AACCGGCCGC AGGACGTCAC CTGGCACGAC GAGGCGCCCG AGGGCAAGCT CGACCTGCTG
ACGGCGGTGG ACTTCCGCAT GACGTCCACG GGCCTGTTCG CGGACGTGGT GCTGCCCGCC
GCGACCTGGT ACGAGAAGCA CGACCTGTCG TCCACGGACA TGCACCCCTT CGTGCACGCC
TTCAACCCGG CGATCGCGCC GCCGTGGGAG GCGCGCAGCG ACTACGACGT GTTCCTGGGC
CTGGCCGACC ACTACTCGGA GCTGGCGAAG ACCCACCTGG GCAAGCGCAC CGACGTGCTG
GCCGTGCCGC TGGCGCACGA CACCCCCGAC GAGATGGCCC AGCCCGGCGG TCGGGTGCTG
GACTGGCGCA ACGGCGACTG CGAGCCGATC CCCGGCCGCA CCATGCCGAA GCTGGTGGTG
ATCGAGCGCG ACTTCGCCGC CACCGCCGAC AAGATGCGCT CGGTCGGCCC GCTGCTGGAG
AAGCTCGGCC TGACCACCAA GGGCATCACC TACCACCCCG AGCCGGAGAT CGAGCTGCTG
CGCCGCACCA ACGGCGTGCG CGGCGACAAC CGGCCGTCGC TGGCCACCGC CGAGCACATG
TGCGAGGCGA TCCTGGCGCT GTCGGCCACC ACCAACGGCA GGCTGGCGGT GGAGGGCTTC
AAGCAGCTGG AGAAGCGCAC CGGGACCAAG CTCGCGGACC TGGCCGAGGA GAACGAGGGC
AAGCGGATCT CCTACCAGGA GGCCAAGAAG GGCCCGCAGG CCGTGCTGAC CTCGCCGGAG
TGGTCGGGCA GCGAGACCGG TGGCCGCCGC TACTCGGCGT TCGTGATCAA CGTGGAGCGG
GACAAGCCCT GGCACACCCT GACCGGGCGC CAGCAGTTCT TCGTCGACCA CGACTGGCTC
ACCGAGCTGG GCGAGCAGCT GCCGGTGTAC CGGCCGCCGC TGAACATGCA CCGCCGGTTC
GGCTCGCAGC AGCTGGGCGA GCCCGGTCGC GCCGAGGTGA CGGTGCGGTA CCTGACGCCG
CACTCGAAGT GGTCGATCCA CTCGGAGTAC CAGGACAACG CGCACATGCT GGCGCTCTCG
CGCGGCGGCC CGGACATCTG GATGTCCACT CAGGACGCCG AGCGGATCGG CGTGGCGGAC
AACGACTGGG TGGAGGCCTA CAACCGCAAC GGCGTCGTGG TGGCCCGCGC GGTGGTCTCG
CACCGGATGC CGGAGGGCAC CGTGTACGTC TACCACGCCA AGGACCGCAA CGTGAACGTG
CCGAAGACCG AGATCGGCGG CAAGCGCGGC GGCGTGCACA ACTCGCTGAC CCGCCTGCTG
CTCAAGCCGA CGCACCTGGT GGGCGGCTAC GCCCAGTTCA CCTACGCGTT CAACTACTAC
GGACCGACCG GCAACCAGCG CGACGAGGTC ACGGTGGTCC GCCGCCGCTC GCAGGAGGTG
GAGTACTGA
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| Protein sequence | MDSTGVDRPR PRGRKFFARG EVSADGRTVH RIDQAEWERF YRDRWAHDKV VRSTHGVNCT
GSCSWQVFVK DGLITWEHQA TDYPSVGPDS PEYEPRGCPR GASFSWYTYS PSRVRYPYVR
GVLLKMWREA KARLGDPVLA WAEITGDPEK SRRYKRARGK GGLIRSTWDE VNELVAAAHV
HTAKAYGPDR VVGFSPIPAM SMASFAAGTR YHSLIGGTLL SFYDWYADLP IASPQIWGDQ
TDVPESADWW NSGYLVMWGS NIPVTRTPDA HFLTEARYKG TKVVAVSPDY ADNVKFADDW
LAPHPGTDGA LAMAMGHVVL TEFFRDRQVP YFSEYTRRYT DLPFLVRLEE RGDAFVPGKF
LTAADLGQDV ENAEFKTVLL NEETGEAVVP QGSLGHRWGE QGEGRWNLEL DGVTPALTLH
GDNAALTTEA VAIDLPRFDV GETEGGGIVR RGVPATRVNG MLVTTVFDLV MARYAVGREG
LPGEWPKSYE DTEAPGTPGW AEEITSVPAA TTARIAREFA RNAERTQGRS MIVVGAGANH
WFHSDTIYRA FLSLVLLTGC QGRNGGGWAH YVGQEKARPV TGMQHLAFAF DWQRPTRHMA
GTAFWYLATD QWRYEGFKAD ELSTPLGTGM LQGKSFADCN AQAARLGWLP SHPTFDRNPL
DLADEAKDAG VPVADHVVSE LKAGRLNFAA EDPDNPANFP RALTVWRANL LGSSGKGNEY
FLRHLLGADA QVRGAETAEG NRPQDVTWHD EAPEGKLDLL TAVDFRMTST GLFADVVLPA
ATWYEKHDLS STDMHPFVHA FNPAIAPPWE ARSDYDVFLG LADHYSELAK THLGKRTDVL
AVPLAHDTPD EMAQPGGRVL DWRNGDCEPI PGRTMPKLVV IERDFAATAD KMRSVGPLLE
KLGLTTKGIT YHPEPEIELL RRTNGVRGDN RPSLATAEHM CEAILALSAT TNGRLAVEGF
KQLEKRTGTK LADLAEENEG KRISYQEAKK GPQAVLTSPE WSGSETGGRR YSAFVINVER
DKPWHTLTGR QQFFVDHDWL TELGEQLPVY RPPLNMHRRF GSQQLGEPGR AEVTVRYLTP
HSKWSIHSEY QDNAHMLALS RGGPDIWMST QDAERIGVAD NDWVEAYNRN GVVVARAVVS
HRMPEGTVYV YHAKDRNVNV PKTEIGGKRG GVHNSLTRLL LKPTHLVGGY AQFTYAFNYY
GPTGNQRDEV TVVRRRSQEV EY
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