Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2027 |
Symbol | |
ID | 8326216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2247241 |
End bp | 2248551 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644942579 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003099820 |
Protein GI | 256376160 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCA CGGCTCAACA ACGGCTGGCC GCGCGAACGA CTGGGATGTT CCGCGCGCTG CGCGTGCGGA ACTACCAGGT GTTCACCTTC GGCCGGCTCA TCTCCGGCAC CGGTGTCTGG ATTCAACGCA TCGCGCAGGA CTGGCTGGTC ATTTCGCTCA CCGGCAGTGC CGCGGCGCTC GGCGTGACCA CCGCGTTGCA ATTCCTGCCC ATCCTGCTGT TCGGCCTGTG GGGCGGGCTC CTGTCCGACC GCTTTTCCCG CAGGCTCCTG CTGGTGATCT CCCAGACTGC GATGGGCGTG ATTGCTCTCG GGCTGGCATT GCTCACCTGT GCCGACCAAG TGGAGATATG GCACGTCTAC GTCGCTGCCT TTCTCCTCGG AGTCGCGAGC GCGGTGGAGA CGCCGGCCCG GCAGTCGTTC CTCTCGGAAA TGGTCGGGAA GGACCTCCTG CACAACGCGG TCAGCCTGGA CTCGGCCTGC TTCCAGGTGG CGAGCCTCGC GGGACCGGCG ATCTCCGGGG TGCTCATCAA CCTGGGGGGC ACCTCGATCG CCTTCGCGTT GTCCGCCGCT TCGTGCGTGG TGGTCATCGC CTCGCTCTGG CTCCTGCGAC CGGCGGAGCT GCATCCGCAC GTGCCGGAGC CGCGAGCGCC CGGTCAGGTC CGCGAAGGCC TGCGGCACGT CTACGGCCAT CCGTCGTTGC TCTGGCCGAT CGTCCTCATG GCGTTCCTCG GCACCTTCGC GTTCAACTTC GCGCTCGTCC TCCCCGTCTA CACCGCCGAC ATCTTCCACT CGGGCGCGGA GACCTTCGGC TGGCTCACGA CCTACCTCGC GGTTGGATCG GTCGCGGGAG CGCTGGGCGC GGCGTGGATG CGGCGCGCGG GCCTGCCTCT CGTCCTCGCG ACAGCGCTCG GCTTCTGCGT GGTCCAGCTC CTGGCCGCCG CGTCGCCTTC GGTGTGGCTG TTCGGCGCCC TCATGGTGCC CACCGGGGCA CTGGGCGTCG TCGTCCACGC CAGCGCCACC TCGGTCGTCC AGAGCACCTG CGCCCCGTCC ATGCGGGGCC GGGTGATGGG TGTCTACAAC CTGGCCTACA TGGGCGGCAT CCCCATCAGC GGCCCCTTGG TCGGCTGGGT GATGGAGCGC TTCGGAGCAC GTCCCGGTTA CGCGATCAGC ACGGCCGTCG CCCTCGTCGG CGCGCTGGTC GCCGCGGCGG CGGTAGCCAG GATCCACCAC CGCACCCACC GCACCCACCG CGGACCCGGC GCCGCGGACT ACCCGTCCTC TTCCAGCGAG TCGAAACCGA GTTCGTCATG A
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Protein sequence | MNSTAQQRLA ARTTGMFRAL RVRNYQVFTF GRLISGTGVW IQRIAQDWLV ISLTGSAAAL GVTTALQFLP ILLFGLWGGL LSDRFSRRLL LVISQTAMGV IALGLALLTC ADQVEIWHVY VAAFLLGVAS AVETPARQSF LSEMVGKDLL HNAVSLDSAC FQVASLAGPA ISGVLINLGG TSIAFALSAA SCVVVIASLW LLRPAELHPH VPEPRAPGQV REGLRHVYGH PSLLWPIVLM AFLGTFAFNF ALVLPVYTAD IFHSGAETFG WLTTYLAVGS VAGALGAAWM RRAGLPLVLA TALGFCVVQL LAAASPSVWL FGALMVPTGA LGVVVHASAT SVVQSTCAPS MRGRVMGVYN LAYMGGIPIS GPLVGWVMER FGARPGYAIS TAVALVGALV AAAAVARIHH RTHRTHRGPG AADYPSSSSE SKPSSS
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