| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2006 |
|---|
| Symbol | |
|---|
| ID | 8326191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 2222764 |
|---|
| End bp | 2224032 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644942555 |
|---|
| Product | isocitrate lyase |
|---|
| Protein accession | YP_003099800 |
|---|
| Protein GI | 256376140 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2224] Isocitrate lyase |
|---|
| TIGRFAM ID | [TIGR01346] isocitrate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.249594 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAGCG CGGAGCAGAT CGCCGACCAG TGGGCCACCG ACGCGCGGTG GTCCGGGATC
GAGCGCACGT ACGGCGCCGA GGACGTGGTC GCCCTGCGCG GCAGCGTCGT GGAGGAGCAC
ACGCTGGCCC GGCGGGGCGC CGAGCGGCTG TGGGAGCTGC TGCACGACGA GGACCACGTC
CACGCGCTGG GCGCGCTGAC CGGCAACCAG GCGGTGCAGC AGGTCAGGGC CGGGCTGAAG
GCCATCTACC TGTCGGGCTG GCAGGTCGCG GCGGACGCGA ACCTGTCCGG GCAGACCTAC
CCGGACCAGA GCCTGTACCC GGCCAACTCG GTGCCGCAGG TGGTCCGGCG GATCAACAAC
GCGCTGCTGC GGGCCGATCA GGTCGAGCAC GCGGAGGGGC GCGGCGGCGA GCGCGAGTGG
CTGGCGCCGA TCGTCGCGGA CGCCGAGGCC GGGTTCGGCG GGGTGCTCAA CGCGTTCGAG
CTGATGCGCG CCATGATCGC GGCGGGCGCG GCCGGGGTGC ACTGGGAGGA CCAGCTCGCG
TCGGAGAAGA AGTGCGGGCA CCTGGGCGGG AAGGTGCTGA TCCCGACCGG GCAGCACGTG
CGCACCCTCA ACGCCGCGCG GCTGGCCGCC GACGTCTCCG GTGTGCCGAC GCTGGTGGTC
GCCCGCACCG ACGCGCAGGC CGCGACGCTG CTGACCACCG ACGTCGACGA GCGGGACCGG
CCGTTCACCA CCGGCGAGCG CACCGCCGAG GGGTTCTACC GGGTGCGGGG CGGGATCGAG
CCGTGCGTCG CCCGGGGGCT GGCGTACGCG CCGCACGCCG ACCTGCTGTG GATGGAGACC
TCGCTGCCGG ACCTGGGCGT GGCGCGGGAG TTCGCCGAGG CGGTCAAGGC CCGCTACCCG
GAGAAGATGC TGGCGTACAA CTGCTCGCCG TCGTTCAACT GGCGCAAGCA CCTGGACGAC
ACGACGATCG CGAAGTTCCA GCGGGAGCTG GGGCACATGG GCTACAAGTT CCAGTTCATC
ACGCTGGCCG GGTTCCACGC GCTCAACCAC TCGATGTTCG ACCTGGCGCG CGGGTACGCC
GAGAGCGGCA TGAGCGCGTA CGTCGAGCTG CAGGAGCGGG AGTTCGCCGC CGAGCGGGAC
GGCTACACCG CCGTGAAGCA CCAGCGCGAG GTCGGGACCG GCTACTTCGA CCGGGTCAGC
ACCGCGCTGA ACCCCGCCGG TGAGACCACC GCGCTGTCCG GGTCCACCGA GCAGGCCCAG
TTCGCCTGA
|
|---|
| Protein sequence | MLSAEQIADQ WATDARWSGI ERTYGAEDVV ALRGSVVEEH TLARRGAERL WELLHDEDHV
HALGALTGNQ AVQQVRAGLK AIYLSGWQVA ADANLSGQTY PDQSLYPANS VPQVVRRINN
ALLRADQVEH AEGRGGEREW LAPIVADAEA GFGGVLNAFE LMRAMIAAGA AGVHWEDQLA
SEKKCGHLGG KVLIPTGQHV RTLNAARLAA DVSGVPTLVV ARTDAQAATL LTTDVDERDR
PFTTGERTAE GFYRVRGGIE PCVARGLAYA PHADLLWMET SLPDLGVARE FAEAVKARYP
EKMLAYNCSP SFNWRKHLDD TTIAKFQREL GHMGYKFQFI TLAGFHALNH SMFDLARGYA
ESGMSAYVEL QEREFAAERD GYTAVKHQRE VGTGYFDRVS TALNPAGETT ALSGSTEQAQ
FA
|
|---|
| |