Gene Amir_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1991 
Symbol 
ID8326176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp2206319 
End bp2206978 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content76% 
IMG OID644942540 
ProductHaloacid dehalogenase domain protein hydrolase 
Protein accessionYP_003099785 
Protein GI256376125 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.117444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACAACG ACAGCACGTT CGACGCCGTC CTGTTCGACT TCTCGGGCAC CCTCTTCGAC 
GACACCGGCG TGCTCGACGC CCGTGGCCTC GCCGCCCGCA CCGGCCTGCC CGAGCCGGAG 
GCGGCGACAA CCCTGCGGCG GGTGCTCGCC CACGTCGACT CGCCGGCCTC GCTCAAGGCC 
CGCAAGGGCG GCGACCTGTC CGTGGAGGCG CACCGCGCGG TGTGGACGGG CCTGATCGCC 
GCGGCGGGAC CGTTCCCGGA CGGCGTGGTG GAGGCCGTCT ACGCGGGTCT GACCGACCCG 
GCGGGCTGGC GCCCCTACCC GGACGCCCTC CCGGTGCTCA CCGAGCTGCG CGCCCGCGGC 
CTGGGGCTGG GCGTGCTCAG CAACATCGGC TGGGACCTGC GCCCCGCGCT CGCGGCGGCC 
GGGGTGCTGG AGCTGCTCGA CGTCGTGGTG CTCTCCTGCG AGCACGGCGT GGAGAAGCCC 
GACCCCGAGC TGTTCGCCGT CGCCAAGGAG CAGCTGCCCG GCCGGGTGCT GTACGTGGGC 
GACGACCCGG TCAAGGACGG CGCGGCCGTG CGCGCCGGGA TGCCCGTCTA CCTGCTGCCG 
AGCGAGCGCT CGGTGGACCG CCCGCGCGGC CTGTCCGCCG TGCTGCGCCT GGCCGCCTGA
 
Protein sequence
MDNDSTFDAV LFDFSGTLFD DTGVLDARGL AARTGLPEPE AATTLRRVLA HVDSPASLKA 
RKGGDLSVEA HRAVWTGLIA AAGPFPDGVV EAVYAGLTDP AGWRPYPDAL PVLTELRARG 
LGLGVLSNIG WDLRPALAAA GVLELLDVVV LSCEHGVEKP DPELFAVAKE QLPGRVLYVG 
DDPVKDGAAV RAGMPVYLLP SERSVDRPRG LSAVLRLAA