Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1988 |
Symbol | |
ID | 8326173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2204210 |
End bp | 2204755 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644942537 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003099782 |
Protein GI | 256376122 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0948482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCCTG CCAGACGGGC CGACGCGCTG GTCAACCGCG AGCGCATCCT GGAGGTCGCG CGGGACGCGC TGGCCGAGTC CGGGTGCGCC TCGCTGAACT CCATCGCCAA GCGCGCGTGC GTCGGCGCGG GGACGCTCTA CCGGCACTTC CCGACCCGCG AGGAGCTGGT GCTCGCGGTG TACCGGCACG AGGTGCAGCG GCTGGTGGAC CGGGCTCCCC GGCTGCTGGC CGAGGTCGGG CCCGAGGAGG CGTTCCGGCG GTGGGCCTCG GGGCTGGCCG GGTACGTGAA GGTCAAGCAC GGGCTGGGCG AGGCGTTCAG CGCGGCCACG CGGGAGAACC TGGTCAGCGA GTCCTACGCG CAGGTGTCCG CCGCGGTCGC GGCGCTGCTG GCGGCCGGGA CGAGCGCGGG GGTGTTCCGC GAGGGGCTGG CGGCCGACGA CGTGCTGCTG CTGATGGGCG GCATGTGGCG GGTGCCGCCG GGCCCGGACG GGGAGCGGCA GGCCGAGCGG GTGCTGGGGC TGGTGGTCGC GGCGCTGCGG GCGTAG
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Protein sequence | MPPARRADAL VNRERILEVA RDALAESGCA SLNSIAKRAC VGAGTLYRHF PTREELVLAV YRHEVQRLVD RAPRLLAEVG PEEAFRRWAS GLAGYVKVKH GLGEAFSAAT RENLVSESYA QVSAAVAALL AAGTSAGVFR EGLAADDVLL LMGGMWRVPP GPDGERQAER VLGLVVAALR A
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