| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1982 |
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| Symbol | |
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| ID | 8326167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 2197172 |
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| End bp | 2199595 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644942531 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003099776 |
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| Protein GI | 256376116 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.405653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAACA GGACGGCGGA CGGTGGCTCC CCCTGGCGGG ACGCGCGCCT GCCGGTGGCC
GATCGGGTCG GGGCGCTGCT CTCGGCCATG ACGCTCCGCG AGAAGCTCGC CCAGCTCGTG
GGCGTCTGGG TGGGGGCCGA CCCCGAGGGC GGGGACGTCG CGCCGCACCA GTCCGAGCTG
ACCGGCGACC CCGTCGACTG GACCGAGGTG ATCTCCGCCG GGCTCGGCCA GCTGACCAGG
CCGTTCGGCA CCAGGCCGGT CGACCCGGTG CTCGGCGCTC GGTCGCTGGC CTCCGCGCAG
GAGCAGATCA CCGCCGCCAG CCGGTTCGGC ATTCCAGCAC TGGTGCACGA GGAGTGCCTC
ACCGGGTTCG CCGCCTGGCG CGCCACCGCG CACCCGGCCC CGCTGTCCTG GGGCGCCTCG
TTCCGGCCGG AGCTGGTCCG GGCCATGGCC GGGCGGATCG GCGCGTCCAT GCGGGCGGCG
GGCGTGCACC AGGGGCTCGC GCCGGTGCTG GACGTGACCC GCGACTACCG CTGGGGGCGC
ACCGAGGAGA CCATCGGCGA GGACCCGCTG CTGGTCGGCG TGGTCGCCAC CGCGTACGTG
CGGGGGCTGG AGGACGCCGG GGTCGTGGCC ACCCTCAAGC ACTTCGCGGG CTACTCGGCC
TCGCGGGCGG GCCGCAACCT CGGACCGGTG TCCATCGGGC CGCGCGAGCT GGCCGACGTG
GTCCTGCCGC CGTTCGCGAT GGCGGTGCGC GACGGCGGCG CGCGGTCGGT GATGAACTCC
TACAGCGAGC TGGACGGCGT GCCCTCGGCC GCCGACGCCG GGCTGCTGAC CGGGCTGCTG
CGCGAGGGGT GGGGCTTCAC CGGGACCGTG GTCGCCGACT ACTTCTCGAT CAAGTTCCTC
CAGACCCTGC ACGGCGTCGC GGGCGACGAG GAGCAGGCCG CCGCGCTCGC CCTCCGCGCG
GGGATCGACG TCGAGCTGCC GACCGTGCGC TGCTACGGGG AACCGCTGCT GCGCGCGGTC
TCGCGCGGTG ACGTCCCGGA GGAGCTGGTG GACCGGGCGG TGCGCCGGGT GCTGGCGCAG
AAGGCGGAGC TGGGACTGCT CGACCCGGAC TGGTCGCCGC TGCCCGAGTC GGTGGACTCG
CTGGAGCTGG ACGACGCCGG CTCGCGGACC ATCGCGCTGG AGCTGGCGCG CGAGTCGGTG
GTGCTGCTGG CCGACGGCGG CGGCGCGCTG CCGCTGCGGC CGTCCGCGCG GGTCGCGCTC
GTGGGGCCGC TGGCGGACGA CCCGATGGCG ATGCTGGGCT GCTACTCGTT CCCCGCGCAC
ATCGGCGTGC ACCACCCGGA CGCCGGGCTG GGCCTGGAGA TCCCGACCGT GCGGGACGGG
CTGCGCGGGC TGGGTGTCGA GGTGGCGCAC GCGGTGGGCT GCGCGGTCGA CGGCGACGAC
CGGTCCGGGT TCGCCGACGC GGTGGCGGCG GCGCGGGACG CGGACGTGTG CGTGGTGGCG
GTGGGCGACC GGGCCGGGCT GTTCGGGCGC GGCACGTCCG GCGAGGGCTG CGACGCGACC
GACCTGACCC TGCCGGGCGT GCAGGCGGAG CTGGTGCGGG AGGTGCTGGC GACCGGGACC
CCGGTGGTGC TGCTGCTGAT CACCGGCCGC CCGTACGCGG TGGGCGAGCT GGTGGCGGGG
TCGGCGGCGG CGGTGCAGGC GTTCTTCCCC GGCCAGCTGG GCGGGCGGGC GATCGCCGAG
GTGCTGACCG GCGCGGTCAA CCCGTCCGGA CGACTGCCGG TGAGCATCCC GGCCGATCCT
TCCGGGCAGC CGGGGACGTA CCTGTCGGCG CCGCTGGGAC GGCGCACCGG GGTGTCCACC
GTGGACCCGA CGCCCGCGTT CCCGTTCGGG CACGGGCTGT CGTACGGCGG GTTCACCTGG
TCGAAGCCCG TGGTGTCGGC GGCGGAGTGG CCGGTGGACG GCGAGGTGCG GGTGGAGCTG
GAGGTGCGCA ACACCGGCGG GGTCGACGGG TCGGACGTGG TGCAGCTGTA CCTGCACGAC
CCGGTGGCGT CGGTGACGCG GCCGGTGGTG CGGCTGGTCG GGTTCGCGAA GGTCGACCTG
GTGGCGGGGG CGGCGGCGCG GGTGGTGCTC GCCGTGCCCG CCGACGTGGC CGCGTTCACC
GGGCTGGACG GGCGGGTGGT CGTGGAGCCG GGCGAGATCC GGCTGCGGGT GTCCCGGTCG
AGCGCGGACG TGCACGGCGA GCTGGTGGTG GACCTGGTGG GCGGGGTGCG CGAGGTGGCG
CACGCGACCC GGCGGTGGAC GGCGACGGCG CTGGTCGAGC CGGTGCGGTC GGGCGGCGCG
CCGGAGCGGG TCGAGCCGGC GGGGTCGGGA GGCGCGCCGG GGGCGCTCGC GGGCGCGGCG
GCCGGAGAGG CTGCGGGGGC ATGA
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| Protein sequence | MANRTADGGS PWRDARLPVA DRVGALLSAM TLREKLAQLV GVWVGADPEG GDVAPHQSEL
TGDPVDWTEV ISAGLGQLTR PFGTRPVDPV LGARSLASAQ EQITAASRFG IPALVHEECL
TGFAAWRATA HPAPLSWGAS FRPELVRAMA GRIGASMRAA GVHQGLAPVL DVTRDYRWGR
TEETIGEDPL LVGVVATAYV RGLEDAGVVA TLKHFAGYSA SRAGRNLGPV SIGPRELADV
VLPPFAMAVR DGGARSVMNS YSELDGVPSA ADAGLLTGLL REGWGFTGTV VADYFSIKFL
QTLHGVAGDE EQAAALALRA GIDVELPTVR CYGEPLLRAV SRGDVPEELV DRAVRRVLAQ
KAELGLLDPD WSPLPESVDS LELDDAGSRT IALELARESV VLLADGGGAL PLRPSARVAL
VGPLADDPMA MLGCYSFPAH IGVHHPDAGL GLEIPTVRDG LRGLGVEVAH AVGCAVDGDD
RSGFADAVAA ARDADVCVVA VGDRAGLFGR GTSGEGCDAT DLTLPGVQAE LVREVLATGT
PVVLLLITGR PYAVGELVAG SAAAVQAFFP GQLGGRAIAE VLTGAVNPSG RLPVSIPADP
SGQPGTYLSA PLGRRTGVST VDPTPAFPFG HGLSYGGFTW SKPVVSAAEW PVDGEVRVEL
EVRNTGGVDG SDVVQLYLHD PVASVTRPVV RLVGFAKVDL VAGAAARVVL AVPADVAAFT
GLDGRVVVEP GEIRLRVSRS SADVHGELVV DLVGGVREVA HATRRWTATA LVEPVRSGGA
PERVEPAGSG GAPGALAGAA AGEAAGA
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