Gene Amir_1975 details

Gene Information

• Locus tag: Amir_1975
• ID: 8326160
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 2187099
• End bp: 2189051
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 644942524
• Product: Alpha-glucuronidase
• Protein accession: YP_003099769
• Protein GI: 256376109
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3661] Alpha-glucuronidase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.212471
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACGGTT CTCTCGGTGC GGCCGAACTG CTCCCCGACG TGCATCCCGC CTGGCTCCCA 
CCCACCGCGT TCCGCGCGCT CGGCGCCCGC CGCGTCCGGG TCGTGGGCGA CGGCCCGATC 
GCCGACACCG TCCGCGCCGA GGCGCTGGCC GCCACCACCG CCCACGGCGG GGCGCTCGTG 
ACCGAGGACC CCGAGCTGGA CCTGGTCCTC ACCGGCCCGG ACGACGACCC CGAGGCGTTC 
GCGATCACCC GCGACGCGGC CGGGACCACC ACCGTCACCG CCTCCGGCCC CGGCCTGCTC 
TACGGCTTCC ACCACCTCGT CCGCGCCGGT GAGAGCGCTT TCCAGGAGAC CGGCGAGCAC 
CACCCCGCCT ACCCGGTCCG GATGCTCGAC CACTGGGACA ACGTCGACGT CCACCCCGTC 
ATGGGCCAGG TCGAGCGCGG CTACTCCGGC GGCTCCCTGC TCTACGCCGA CGGCGCCGTC 
CGCCCCGACC TCACCCGCGT CGCCGCGTAC GCCCGCCTGC TCGGCTCGAT CGGCGTGAAC 
CGGGTGGCGC TCAACAACGT CAACGTGCAC CGCACCGAGG CCCGCCTGCT GACCGACCTG 
CTCCCCGAGG TCGTCCGCCT GGCCGAGGTG TTCCGCCCGC ACGGGATCCG CGCGCACCTG 
TCGGTCACCT TCGCCTCCCC GATCCTGCTC GGCGGCCTGA CCACCGCCGA CCCGCTCGAC 
CCCGAGGTCC GCTCCTGGTG GGCCCGCACC ACCGCCGCCG TCTACGCCGC CATCCCCGAC 
TTCGGCGGCT ACGTCGTCAA GGCCGACTCG GAGGGCCAAC CCGGTCCGTT CAGCTACGGC 
CGCGACCACG CCGACGGCGC CAACGCGCTC GCCGAGGCCC TGGAACCGTT CGGCGGCACG 
GTGTTCTGGC GCGCCTTCGT CTACGACCAC CACCAGGACT GGCGCGACCG CACCACCGAC 
CGCGCCCGAG CCGCGCACGA CCACTTCACC CCGCTGGACG GCGAGTTCGC CGACAACGTC 
GTGCTCCAGG TCAAGAACGG CCCCATCGAC TTCCAGCCCC GCGAACCGGT CTCCCCGGTC 
ATCGCCGCCA TGCCGACCAC CCGGCTGGCC GTGGAGTTCC AGGTCACCCA GGAGTACACC 
GGCCAGCAGC GGCACGTCTG CTACCTGGGG CCGCAGTGGA GCGAGGTCCT GCGCTTCCCC 
TTCGGCGACC GGGAGGTCCA CACCCTCGCC GCCGGGGTCA CCGCCGTCTC GAACGTCGGC 
GACGACCCGT TCTGGACCGG GCACCCCTTG GCGCAGGCCA ACCTCTACGC GTTCGGCAGG 
CTCGCCTGGG ACCCGACCGC CGACCCCGAC GAGCTCCTGC GCGAGTGGAT CGCCCTCACC 
TTCCCCGACC CGGCGGCCCA CGCCCCGCTG CACGAGCTGA TGTCCGGCTC CTGGCGCGCG 
TACGAGGACT ACACCGCCCC GCTGGGCGTG GGCTTCATGG TCCGACCGGG CGACCACTAC 
GGCCCGGACG TCGACGGCTA CGAGTACACC CGCTGGGGCA CCTACCACTT CGCCGACCGC 
GACGGCGTCG GCGTCGACCG CACCCGCGCC ACCGGCACCG GCTTCACCGG CCAGTACCCG 
CAGCCGTGGC GCGAGGTGTA CGAGGACCCT GGCACCTGCC CGGACGAGCT GCTGCTGTTC 
TTCCACCACG TCCCGTACGG GCACGTGCTG CACTCGGGGA AGACGGTGGT GCAGCACGTC 
TACGACACGC ACTTCGCCGG GGTGGAGGCC GTCGAGCGGA TGGTGACGAC CTGGGAGTCG 
TTGCGCGGCA AGGTCTCCGA CGACGTGCAC GAGCGCGTCA CCGAGCGGCT GGTCGAGCAG 
CTGCGGTGCG CGGTGGAGTG GCGCGACCAG GTCAACACCT ACTTCCTGCG CAAGTCCGGA 
GTCCCCGACG CGCACGGCCG GACCATCCAC TGA 

 

Protein sequence

MNGSLGAAEL LPDVHPAWLP PTAFRALGAR RVRVVGDGPI ADTVRAEALA ATTAHGGALV 
TEDPELDLVL TGPDDDPEAF AITRDAAGTT TVTASGPGLL YGFHHLVRAG ESAFQETGEH 
HPAYPVRMLD HWDNVDVHPV MGQVERGYSG GSLLYADGAV RPDLTRVAAY ARLLGSIGVN 
RVALNNVNVH RTEARLLTDL LPEVVRLAEV FRPHGIRAHL SVTFASPILL GGLTTADPLD 
PEVRSWWART TAAVYAAIPD FGGYVVKADS EGQPGPFSYG RDHADGANAL AEALEPFGGT 
VFWRAFVYDH HQDWRDRTTD RARAAHDHFT PLDGEFADNV VLQVKNGPID FQPREPVSPV 
IAAMPTTRLA VEFQVTQEYT GQQRHVCYLG PQWSEVLRFP FGDREVHTLA AGVTAVSNVG 
DDPFWTGHPL AQANLYAFGR LAWDPTADPD ELLREWIALT FPDPAAHAPL HELMSGSWRA 
YEDYTAPLGV GFMVRPGDHY GPDVDGYEYT RWGTYHFADR DGVGVDRTRA TGTGFTGQYP 
QPWREVYEDP GTCPDELLLF FHHVPYGHVL HSGKTVVQHV YDTHFAGVEA VERMVTTWES 
LRGKVSDDVH ERVTERLVEQ LRCAVEWRDQ VNTYFLRKSG VPDAHGRTIH