Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1970 |
Symbol | |
ID | 8326155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2180087 |
End bp | 2182594 |
Gene Length | 2508 bp |
Protein Length | 835 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 644942519 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003099764 |
Protein GI | 256376104 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000157383 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCTCG GACGCGACCG GCAGCGCGTC GCCGTGGACG CACTGCTCGA CCACGCCCGC GCGGGCCGTG GGGGAGCTCT CGTGCTGCGC GGCGGTCCCG GCACCGGCAA GACCGCGCTG CTCCGCGCCG CCCGCCGCGC CGCCGCCGAC TTCGCCGACG ACCCCCGCCT CGTCCTCCTC TGCGTGGACG ACGCGCACCT GCTCGACCTC TCCGCCCTCC TCACCCTCCT CCCCGACCTC ACCTCCGAAC CCGTCGCCGT CCTCCTCGCC TGCGAGACCG ACCTCCCCCA CCTCCCCAGC GTCGAGCTCA CCCCCCTCAC CCACCCCGAC TCCCTGCGCG TCCTCCACGA CCTCCGCCCC GGCCTCCCCG CCGACCTGGC CGCCGACCTC GCCCACCTCG CCTGCGGCAA CCCCCTGGCC CTGGTCGAAC TAGCCGCCGC CCTCACCGCC GAGCACCTCG GCGGCACCGC CCCCGCCCCC ACCGCCCTCC CCGCCGACAG CCTCCTCCGC TCCCGCCTGC GCGCCCGCTT CCACGCCCTC TCCCCCCGAG CCCGCACCGC CGCCGCCCTG TCCCTGGTCG ACCCGGACCT CGACCCCGAC ACCCTCGCCC GCCTCCCCGA CGTGGGCCCC GCCGCCGTCC AGGAAGCCGC CCCGCTCCTC ACCCCCGGCC CGCTCACCCG CACCACCCTC GCCGCCGAAC TCCCCCTCTC CGAGCGCTAC GCCGCCCACA CCACCCTCGC CAAAGCCCTC CCACCCGGCC CCCGCCGCAC CTGGCACCAG GCCGCCACCG CCCCCGGCGC CCGCGACGCC CAAGCCGAGC GGTTGCACGC CGAGGCCCGT CGCGCCCGCC GCTGCGGCGA CCACGTCCGC GCCGCCCGAG ACCACGACCG CGCCGCCGCC CTCACCAGCG CCCCCGCCCT CCGCGCCCGC CGACTGGTCA GCGCCGCCGC CGACCACTGG ACCTCGGGCT CCGCGGGCCC CGCCAGGTCC GCCCTCACCG CCGCCGCCCG CCTGTCCGAC AGCCCGGAGC TCCGCGCGCT CGCCGACCTG GTCCGGGGCG GCCTCGACCT GGGCGGCGGC CAACCGGACG GCGCCGCCCG CAGGCTCCTG CGCGCCGCCG CCGACCTCGC GGGCGCGCAC CGCGCCCAAG CCGCCCTGGC CCTCGGCTTC GCGGGCGAGG CCGCGTGCAG CGCTGGCGAC CACGCCCTGC ACACCGAGAT CGCCCACGCC GCCGCCGCCC TCCGCGCACC CGACGACCCC GACCCGCAAG CCCTCGTCCT CGACCACGTC CTCGGCATGG AAGCCACCTT CCGGGGCCGC CACGCCGAAG CCGTCCCGCT GCTGCGCGCC GTGGTCGCCA CCGCCGAGCG CACCCCCGTC CCGCAGGCGG GCGTCTGGGG CGGGCACGCC GCCTACGTCC TCGGCGACTC CGCCAAGGCC CACGAGCTCG CAGGCGGCGC GGTGGTCGCC ACCCGCGAGC GCGGGCTCAC CGCGTTCCTC CCCTGGGCGC TGATCTACCA GGCCCTGTCG GCGCTCCTGC TCGACCGCCA CGCCCTCGCG TTCTCCGCCG CGTTCGAGGG CCTGCACGCC GCCGAGGCCG TCGGCCAGCG CAACGCCGCC GCCGACCACC TGATGATCCT CGCCCTGCTG TCCGCCCTGC GCGGCGACTG CGACACCGCC CTGCACCGCG TCGACACCGC CGCCGAGCAG GTCTCCCGCC ACGGCCTCGG CCGCGCCGGA ACGCTGGCGG CGTGGGCGCT GGCCTGCGTC GACCTGGCCC GCGAACGCCC CGTCGTCGCG CTGGAGCGGT TGCGGGCGCT GGAGTCCGGC GGACGGTACG GGGGCGTGCA CGAGGGCATC CGCACCATGG CCGTGCCGCA CCTGGTCGAG GCGGCGGCCG GGTGCGGCGA GGTCGGGTGG GCCGAGCGGG AGCTGCGGCG GTTCCGGCGG TGGGCGGACA GCGGGGGCAG CGCCGCCCGG CAGGCCGTGG TGCACCGGTG CCTCGGGGTC CTGGCCGACG GGGACGCCGC GCGGGAGCAC TTCACCGAGG CGCTGCGGCT GCACCGGGGG AGCGGCGGGG CGCTGGAGCT GGCGAGGACG CAGCTGGTCC ACGGGCGGTG GCTGCGCAGG TCCCGGCGGC CGAGGGCGGC GCGGGAGGTG CTGCGGGAAG CCGCGGACAT CTTCGAGCGG CAGGAGGCCG AGCACTGGGC GGCGCGGGCG CGCGCCGAGC TGCGGGCGGC GGGGGAGACG GCGCCCGGCG GTGAGCGGAC CGTCGAGCGG ACGGGCGACC GACCCGGCGG CCGACCCGGC GGCCGGTCCG GCGGGGGCTT CGCCGAGCTG ACCCCGCAGC AGGCCAGGAT CGCCCGCCTG GTCGCGGAGG GGGCGAGCAA CCGGGAGGTC GCGGCCCGGC TGTTCCTGAG CCACCGCACC GTCGAGCACC ACCTGCGGAA CATCTTCGCC CGCCTGGAAG TGCGGTCGCG GGTGGAGCTG GTCAAGCGGT TCGGCTGA
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Protein sequence | MLLGRDRQRV AVDALLDHAR AGRGGALVLR GGPGTGKTAL LRAARRAAAD FADDPRLVLL CVDDAHLLDL SALLTLLPDL TSEPVAVLLA CETDLPHLPS VELTPLTHPD SLRVLHDLRP GLPADLAADL AHLACGNPLA LVELAAALTA EHLGGTAPAP TALPADSLLR SRLRARFHAL SPRARTAAAL SLVDPDLDPD TLARLPDVGP AAVQEAAPLL TPGPLTRTTL AAELPLSERY AAHTTLAKAL PPGPRRTWHQ AATAPGARDA QAERLHAEAR RARRCGDHVR AARDHDRAAA LTSAPALRAR RLVSAAADHW TSGSAGPARS ALTAAARLSD SPELRALADL VRGGLDLGGG QPDGAARRLL RAAADLAGAH RAQAALALGF AGEAACSAGD HALHTEIAHA AAALRAPDDP DPQALVLDHV LGMEATFRGR HAEAVPLLRA VVATAERTPV PQAGVWGGHA AYVLGDSAKA HELAGGAVVA TRERGLTAFL PWALIYQALS ALLLDRHALA FSAAFEGLHA AEAVGQRNAA ADHLMILALL SALRGDCDTA LHRVDTAAEQ VSRHGLGRAG TLAAWALACV DLARERPVVA LERLRALESG GRYGGVHEGI RTMAVPHLVE AAAGCGEVGW AERELRRFRR WADSGGSAAR QAVVHRCLGV LADGDAAREH FTEALRLHRG SGGALELART QLVHGRWLRR SRRPRAAREV LREAADIFER QEAEHWAARA RAELRAAGET APGGERTVER TGDRPGGRPG GRSGGGFAEL TPQQARIARL VAEGASNREV AARLFLSHRT VEHHLRNIFA RLEVRSRVEL VKRFG
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