Gene Amir_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1959 
Symbol 
ID8326144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp2169772 
End bp2170413 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content79% 
IMG OID644942508 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003099753 
Protein GI256376093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0909176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGCGC GCGCGGACGG CGGGGCGGCG AGCGCGGTGC GCCCGAGGCG GGCCGACGCC 
CGGCGCAACC ACGACCGGAT CGCGCGTGCG GCCGTGGAGG CGTTCGGCCG CCGGGGGCCC 
GAGGGGCCGA GGCTGGAGGA CGTGGCGGCG CTGGCCGGGG TCGGCGTGGC GACGGTGTAC 
CGCCTGTTCG GCGACCGGGA CGGGGTGCTG CGGGCGGCGT TCGAGCTGTT CTTCGCGGAG 
CGGGTGACGC CGCTGGTGCT GGAGGCGAGG GCGGGGTCCG ACCCCGGCGC CGGGTTGCGG 
CTGGTGGTGG CGGGGGCGGT GGAGGCGTTC GCGGACCACC GCTCGCTGGT GGTCGCGGCG 
AAGCACGCGG CCCTGATCGA GCCGGAGACC CTGGACCGCC TGCTCGGCGA GATGGCGGAC 
CTGCTGCTGG AGGCGCAGCG GCTCGGCCAG GTGCGCGACG ACGTGGTGGT GGGCGACCTC 
GGCGGGCTGC TGATGATGGC GCTGGCGGTC TCCCAGCTGC CGGACCGGCT CCGGAACCTG 
GCCCTGCTGT GGGACGGCCT GCGCCCCGGC GGTTCGGCCC TGCCCACCCC CGAGGGCTGC 
CGACACCCGA GTGCCGCCGA CGGCGGGGTC CCCCCGGCCT AG
 
Protein sequence
MVARADGGAA SAVRPRRADA RRNHDRIARA AVEAFGRRGP EGPRLEDVAA LAGVGVATVY 
RLFGDRDGVL RAAFELFFAE RVTPLVLEAR AGSDPGAGLR LVVAGAVEAF ADHRSLVVAA 
KHAALIEPET LDRLLGEMAD LLLEAQRLGQ VRDDVVVGDL GGLLMMALAV SQLPDRLRNL 
ALLWDGLRPG GSALPTPEGC RHPSAADGGV PPA