| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1954 |
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| Symbol | |
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| ID | 8326139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 2162777 |
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| End bp | 2164489 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644942503 |
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| Product | LPXTG-motif cell wall anchor domain protein |
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| Protein accession | YP_003099748 |
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| Protein GI | 256376088 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3889] Predicted solute binding protein |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.614483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCACT ATCGGTTCAT GCGTTTGAGT CGACTCTCGG TAGTTGCGGG TATTGCCACC
GGTCTGGTTG TCACGACGGC CACCGTCGTC CTGGCCAGCG CCCAGGCCAG CCCCTCCCCC
GCCACGGGCC CCGGCCCGTG CGTCGGCGCC GAGTGCCCGG CCGAGTACGC GCCGGTCCGC
GGCAACAGCG GGCGGTTCGA CGGGCGCGAC GAGGCGGTCA ACGTGTTCGT CGGCAAGTCG
TTCACCGTGT CCGGCAACGC GGCCGAGGCC GAGGGCAGGC TCGTCGTCGG GGGCTCGTTC
ACCCTGGCGA AGGACGGCAG CGGCGTCGGC TACAACGTCG GGACCGTGGG CGCGGGCTCG
CAGGTGCCGC CGCCCGCGGG CTCGGACTTC CTGGTCACCG GCGGGGACCT GACCATCGCG
CCGGGCCAGG AGCTGCGCGC CGACGGCGGT GTCGTGCGGT ACGCGGGCAC CAAGACCGGC
GTGGTCAGCA GCACCGGCGC CGCCGTGCAG GACGACAACG CCTTCGCGCC CTACGCGGGC
ATCGGCGAGG CGCTCCGCGA GGACAGCGCC TGCTACGCCG CGCTCCCCGC CACCGGGACG
GTCACCCGCG ACGACCTCGC CACCACGTTC ACCGGCGACG GCGTGTCCGC GCTCCAGGTC
TTCACCCTGG CGGGCGACAT CACCGGGGCG AACGGGTCGA TGCAGGGCAT CGAGTTCGTG
GGCGTCCCGG ACGGCGCGAC CGTGCTGGTC AACGCCACCG GTTCCGCGCC CCGCATCACC
AGCTGGTCCG GCACGCACAA CAACCGCGAC GGCATCGACC GCCTCGGGCA GCGGCTGCTG
TGGAACTTCC CGAACGCCAC GACCGTGACC CTGAACGGCC AGTCCGAGTT CCAGGGCAGC
GTGGTCATCC CCCGCCAGGA CAGCACCGCG AAGGTCAGCA CCCCCGGCTT CAGCGGGCGG
TTCTTCACGG CGGGCTCGCT GGAGCACGGC GGCAACGGCA GCGGCGACGG CAACGAGTTC
CACGCGTACC CGTTCACCGG CGTGATCCCG ACCTGCGGCA CCGGCACCAC GACGGTCCCG
AGCAGCAGCA CGACCAGCAG CACCAGCACG ACGACGGTCG AGACCACGAC GTCGAGCAGC
ACCACGACCA CCGCGCCCAG CACCACGACG ACCGCGCCGA CGACCACCAC CGCGCCGAGC
ACCAGCACCA CCACGAGCAC GACCGTCGAG ACCACGACCA CGACGCCGTG CGAGGAGACC
ACCCCGGAGA CCAGCACCAC CACCACGGTC CCGACCACGA CGACCGCGCC GAGCACCAGC
ACGACGACCA GCACCACGAC GGTCGAGACC ACCCCGGAGT CGAGCACCCC GGAGACCAGC
ACCAGCAGCA GCTCCACCAC GACCACCGCG CCGTCGACCA CGTCCTCGTC CTCCTCGGCG
ACGACCTCGT CGACCACCTC CGCGACGACC TCGTCGTCGT CGACGTCCGA GACCACCTCG
GCGACGACGT CGACCAGCAC TGAGGCGTCG AGCACCACCG CCACGAGCCC GAGCACCTCG
GAGAACCCGG TCGTCCCGGC CGTCGCGAAG ACCTCGGGCG GCGCGGGCCT GGCCCACACC
GGCTCCCCCG CCGGGATGGC GCTGGCCATC GGCGCGCTCC TGCTGATCGG CGGCGCGGCG
CTGTTCGCGG TGACCCGCCG CCGCAAGGTC TGA
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| Protein sequence | MPHYRFMRLS RLSVVAGIAT GLVVTTATVV LASAQASPSP ATGPGPCVGA ECPAEYAPVR
GNSGRFDGRD EAVNVFVGKS FTVSGNAAEA EGRLVVGGSF TLAKDGSGVG YNVGTVGAGS
QVPPPAGSDF LVTGGDLTIA PGQELRADGG VVRYAGTKTG VVSSTGAAVQ DDNAFAPYAG
IGEALREDSA CYAALPATGT VTRDDLATTF TGDGVSALQV FTLAGDITGA NGSMQGIEFV
GVPDGATVLV NATGSAPRIT SWSGTHNNRD GIDRLGQRLL WNFPNATTVT LNGQSEFQGS
VVIPRQDSTA KVSTPGFSGR FFTAGSLEHG GNGSGDGNEF HAYPFTGVIP TCGTGTTTVP
SSSTTSSTST TTVETTTSSS TTTTAPSTTT TAPTTTTAPS TSTTTSTTVE TTTTTPCEET
TPETSTTTTV PTTTTAPSTS TTTSTTTVET TPESSTPETS TSSSSTTTTA PSTTSSSSSA
TTSSTTSATT SSSSTSETTS ATTSTSTEAS STTATSPSTS ENPVVPAVAK TSGGAGLAHT
GSPAGMALAI GALLLIGGAA LFAVTRRRKV
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