| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1921 |
|---|
| Symbol | |
|---|
| ID | 8326106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 2131354 |
|---|
| End bp | 2131851 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644942470 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003099715 |
|---|
| Protein GI | 256376055 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCA CCGGGGTCGC GGACCTCCGG ATATCCGGGG GGCTGCTGCT CCCGCACCTC
GTGCGGGAGC GGGTCGCCGC CGCCCTGCCC GGCGCCGAGC GGGACCGGCT GCTCGACCTG
CTCATGGTGG TGAACGCCCT GGTGGAGAAC GCGCTGGAGC ACGCCGAGGG CCCGCGCGAG
CTGCGCCTGT GCCGGTCGCC GGTGCGGGTG GAGGTCGACG ACGCGAGCCC GCAGCTGCTG
CCCGTGCTGG GCAGGCCGGG TCGGCGTCAC CGGGGGTTGC TGCTGGTCAA CCGGTTGGCG
AGCCGCTGGG GGGTGCTGCC GTCCGCCGGG GTGAAGACGG TGTGGGCGGA GGCGGGCTGG
AGCCTGCCGC AGCCGTCGCC GCCCGCGCTC GCCCTCCCGC GGGACGGGCG GGGCCCGAAC
GGTTCCGACC CGAACGAGTC GAGCCCGAAC GGCCTCGGTC CCCGCGACCT GAGCGCCGAG
GGGCTGCACC TCGACTAG
|
|---|
| Protein sequence | MNTTGVADLR ISGGLLLPHL VRERVAAALP GAERDRLLDL LMVVNALVEN ALEHAEGPRE
LRLCRSPVRV EVDDASPQLL PVLGRPGRRH RGLLLVNRLA SRWGVLPSAG VKTVWAEAGW
SLPQPSPPAL ALPRDGRGPN GSDPNESSPN GLGPRDLSAE GLHLD
|
|---|
| |