Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1907 |
Symbol | |
ID | 8326092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2116138 |
End bp | 2117838 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644942456 |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_003099701 |
Protein GI | 256376041 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAGGAC CGGCTGAGGA CTCCTCCTCG CAACGGCTCC TGGCGGGCCT GAGGCTCGAC GAGCTGCTGG AGGAGATGCG GGAGCGGCTC ACCGAGATCG GCTCCACCAG GGACAAGATG CAGCGCCTGC TGGACGCGGT GCTCGCCGTG GGCACGGGGC TGGAGCTGGA CTCCACGCTG CAGCGGATAG TGCAGGCCGC CGTCGACCTG GTCGGCGCGC GGTACGGGGC GCTGGGCGTG CTCGGCAACC GCGACGACCT CTCCGAGTTC GTCCACGTCG GCATCGACCA GGACGAGCGC GCCCGCATGG GGCACCTGCC GCAGGGCAAG GGCCTGCTCG GGCTGCTCAT CAAGGACCCG AGACCGGTGC GGCTGCACGA CCTCGGCGCG CACCCGGCGT CCGTCGGCCT GCCGCCGAAC CACCCGCCGA TGAAGACCTT CCTCGGCGTG CCCGTGCGGG TGCGCGACGA GGTGTTCGGC AACCTGTACA TGGCCGAGAA GCGGGACGGC GGCGACTTCA CCCCCGACGA CGAGATCGTG CTGTCGGCGC TGGCCGCCGC GGCGGGCGTC GCGGTGGAGA ACGCCCGGCT GTTCGAGAAG TCCCGGATGC GCGAGCGCTG GCTGGAGGCC GCCGCCGAGG TCAACGCCGA GCTGCTGGGC GGCGCGTCCG CCGAGGACGC GCTGCGGCTG ATCTCCCAGC GCACCCGCGA GCTCGCGGCG GCGGCGGTGT CGCTGATCGT GCTCGCCGAG GAGGGGAAGA ACGGGCGGCG GCTGCTGCGG ATGGCCTCGG CGGCGGGCGG CGACACCGAC CGGCTCGTCG GCGGACTGCT GGACGGCGAG AACACGTTCG CACACCAGGT GCTGGACTCC GGGGTGCCCG CGCTGTTCGA GCGCCTCGAC GGCGGGCTCG GCGAGGCCAG CCTGGAGCTG GGGCCCGGTG TGGCGGTGCC GCTGCGCACC GCCTCGCAGG TGACCGGCGT GCTGCTGGCC GCCCGCGACG TGGGCGCGGC CCAGTTCGGC GCCGAGCAGG TGCCGCTGCT GGCCTCGTTC GCCGCTCAGG CCGCCGTGGC GCTGGAGCTG GCCGAGACGC AGCGCAACCG GCGGCTGGTG GACGTGCTGG AGGACCGCGA CCGGATCGCC CGCGATCTGC ACGACCACGT CATCCAGCGG CTGTTCGCCA CCGGCATGAG CCTGCAGGGC GCGCTCAACC GGGTCGAGGA CCCCAAGCTG CGCGAGCGGG TCGACAACGC CGTGCACCAG CTCGACCAGA CCGTGCTGGA GATCCGCACC ACGATCTTCG ACCTCCAGGC GGCCGACGAC GAGCCGGGTC TGCGGCGCAG GCTGCTGGAC ATCGTGTCGC AGGTGACCGA GCACTCGGCG CTCACGCCCG CCGTGCGGAT GAACGGCACG GTGGACAACT CGGTGCCCGA CCACGTCGGC GAGCACGCCG AGGCGGTGGT GCGGGAGCTG GTCAGCAACG CGGTGCGGCA CTCCGGCGCG AGCGAGCTGA CGGTGACCAT CGAGGCCGAC CGGCAGCTGA CGATCTCGGT GGTGGACAAC GGGATCGGGA TGCCGGAGAA GGTCGCGCGC AGCGGGCTGC GGAACCTGGA CGAGCGGGCC CGACGGCTCG GCGGCAGCGC GGTGGTGGAG GCGTGCGCGG GCGGCGGGAC GCGTGTCACG TGGCAGGTTC CCCTGGAGTG A
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Protein sequence | MTGPAEDSSS QRLLAGLRLD ELLEEMRERL TEIGSTRDKM QRLLDAVLAV GTGLELDSTL QRIVQAAVDL VGARYGALGV LGNRDDLSEF VHVGIDQDER ARMGHLPQGK GLLGLLIKDP RPVRLHDLGA HPASVGLPPN HPPMKTFLGV PVRVRDEVFG NLYMAEKRDG GDFTPDDEIV LSALAAAAGV AVENARLFEK SRMRERWLEA AAEVNAELLG GASAEDALRL ISQRTRELAA AAVSLIVLAE EGKNGRRLLR MASAAGGDTD RLVGGLLDGE NTFAHQVLDS GVPALFERLD GGLGEASLEL GPGVAVPLRT ASQVTGVLLA ARDVGAAQFG AEQVPLLASF AAQAAVALEL AETQRNRRLV DVLEDRDRIA RDLHDHVIQR LFATGMSLQG ALNRVEDPKL RERVDNAVHQ LDQTVLEIRT TIFDLQAADD EPGLRRRLLD IVSQVTEHSA LTPAVRMNGT VDNSVPDHVG EHAEAVVREL VSNAVRHSGA SELTVTIEAD RQLTISVVDN GIGMPEKVAR SGLRNLDERA RRLGGSAVVE ACAGGGTRVT WQVPLE
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