Gene Amir_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1907 
Symbol 
ID8326092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2116138 
End bp2117838 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content73% 
IMG OID644942456 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_003099701 
Protein GI256376041 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAGGAC CGGCTGAGGA CTCCTCCTCG CAACGGCTCC TGGCGGGCCT GAGGCTCGAC 
GAGCTGCTGG AGGAGATGCG GGAGCGGCTC ACCGAGATCG GCTCCACCAG GGACAAGATG
CAGCGCCTGC TGGACGCGGT GCTCGCCGTG GGCACGGGGC TGGAGCTGGA CTCCACGCTG
CAGCGGATAG TGCAGGCCGC CGTCGACCTG GTCGGCGCGC GGTACGGGGC GCTGGGCGTG
CTCGGCAACC GCGACGACCT CTCCGAGTTC GTCCACGTCG GCATCGACCA GGACGAGCGC
GCCCGCATGG GGCACCTGCC GCAGGGCAAG GGCCTGCTCG GGCTGCTCAT CAAGGACCCG
AGACCGGTGC GGCTGCACGA CCTCGGCGCG CACCCGGCGT CCGTCGGCCT GCCGCCGAAC
CACCCGCCGA TGAAGACCTT CCTCGGCGTG CCCGTGCGGG TGCGCGACGA GGTGTTCGGC
AACCTGTACA TGGCCGAGAA GCGGGACGGC GGCGACTTCA CCCCCGACGA CGAGATCGTG
CTGTCGGCGC TGGCCGCCGC GGCGGGCGTC GCGGTGGAGA ACGCCCGGCT GTTCGAGAAG
TCCCGGATGC GCGAGCGCTG GCTGGAGGCC GCCGCCGAGG TCAACGCCGA GCTGCTGGGC
GGCGCGTCCG CCGAGGACGC GCTGCGGCTG ATCTCCCAGC GCACCCGCGA GCTCGCGGCG
GCGGCGGTGT CGCTGATCGT GCTCGCCGAG GAGGGGAAGA ACGGGCGGCG GCTGCTGCGG
ATGGCCTCGG CGGCGGGCGG CGACACCGAC CGGCTCGTCG GCGGACTGCT GGACGGCGAG
AACACGTTCG CACACCAGGT GCTGGACTCC GGGGTGCCCG CGCTGTTCGA GCGCCTCGAC
GGCGGGCTCG GCGAGGCCAG CCTGGAGCTG GGGCCCGGTG TGGCGGTGCC GCTGCGCACC
GCCTCGCAGG TGACCGGCGT GCTGCTGGCC GCCCGCGACG TGGGCGCGGC CCAGTTCGGC
GCCGAGCAGG TGCCGCTGCT GGCCTCGTTC GCCGCTCAGG CCGCCGTGGC GCTGGAGCTG
GCCGAGACGC AGCGCAACCG GCGGCTGGTG GACGTGCTGG AGGACCGCGA CCGGATCGCC
CGCGATCTGC ACGACCACGT CATCCAGCGG CTGTTCGCCA CCGGCATGAG CCTGCAGGGC
GCGCTCAACC GGGTCGAGGA CCCCAAGCTG CGCGAGCGGG TCGACAACGC CGTGCACCAG
CTCGACCAGA CCGTGCTGGA GATCCGCACC ACGATCTTCG ACCTCCAGGC GGCCGACGAC
GAGCCGGGTC TGCGGCGCAG GCTGCTGGAC ATCGTGTCGC AGGTGACCGA GCACTCGGCG
CTCACGCCCG CCGTGCGGAT GAACGGCACG GTGGACAACT CGGTGCCCGA CCACGTCGGC
GAGCACGCCG AGGCGGTGGT GCGGGAGCTG GTCAGCAACG CGGTGCGGCA CTCCGGCGCG
AGCGAGCTGA CGGTGACCAT CGAGGCCGAC CGGCAGCTGA CGATCTCGGT GGTGGACAAC
GGGATCGGGA TGCCGGAGAA GGTCGCGCGC AGCGGGCTGC GGAACCTGGA CGAGCGGGCC
CGACGGCTCG GCGGCAGCGC GGTGGTGGAG GCGTGCGCGG GCGGCGGGAC GCGTGTCACG
TGGCAGGTTC CCCTGGAGTG A
 
Protein sequence
MTGPAEDSSS QRLLAGLRLD ELLEEMRERL TEIGSTRDKM QRLLDAVLAV GTGLELDSTL 
QRIVQAAVDL VGARYGALGV LGNRDDLSEF VHVGIDQDER ARMGHLPQGK GLLGLLIKDP
RPVRLHDLGA HPASVGLPPN HPPMKTFLGV PVRVRDEVFG NLYMAEKRDG GDFTPDDEIV
LSALAAAAGV AVENARLFEK SRMRERWLEA AAEVNAELLG GASAEDALRL ISQRTRELAA
AAVSLIVLAE EGKNGRRLLR MASAAGGDTD RLVGGLLDGE NTFAHQVLDS GVPALFERLD
GGLGEASLEL GPGVAVPLRT ASQVTGVLLA ARDVGAAQFG AEQVPLLASF AAQAAVALEL
AETQRNRRLV DVLEDRDRIA RDLHDHVIQR LFATGMSLQG ALNRVEDPKL RERVDNAVHQ
LDQTVLEIRT TIFDLQAADD EPGLRRRLLD IVSQVTEHSA LTPAVRMNGT VDNSVPDHVG
EHAEAVVREL VSNAVRHSGA SELTVTIEAD RQLTISVVDN GIGMPEKVAR SGLRNLDERA
RRLGGSAVVE ACAGGGTRVT WQVPLE