| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1899 |
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| Symbol | |
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| ID | 8326084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 2109279 |
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| End bp | 2110241 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644942448 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003099693 |
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| Protein GI | 256376033 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0768059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTGA CGAAGCCCAA CGCCGACCAG AGCCGTCGCC GAGCGTCGGA GCAGGCCGCC
GACGCCGACC TGTTCGGCCA GTACCTGCGC CAGGTCGGCT CGACGCCGCT GCTCACCGCG
GCGGAGGAGG TCGTGCTGTC CAGGCGCATC GAGGCGGGCG TGTACGCCGA GCACCTGCTC
GCCGACACCG CCCCCACGCC CGCGCGCCGC CGCGCCCTGA ACCAGGTGGT CGCGGACGGC
CGGGACGCCA AGGACCACAT GATCCGGGCC AACCTGCGCC TGGTGGTGTC GGTGGCGAAG
AAGCACTCGT TCCGGGGGCT GCCGCTGCTG GACGTGGTCC AGGAGGGCAA TCTCGGGCTG
ATCCGCGCGG TCGAGAAGTT CGACTACAGC AAGGGGTACA AGTTCTCCAC GTACGCCATC
TGGTGGATCA GGCAGGCGAT CGAGCGCGGG CTGGCCGAGC AGACCAGGAC GGTGCGCCTG
CCGGTGCACG TGGTCGAGGA GCTGTCGAAG ATCAAGAAGG CGGAGCGCAA GCTGCGCGCC
GAGCTGGACC GCGAGCCGAC GGTCGAGGAG CTGGCCGGGG CGACGGGCCT GCGCGCGCCG
CGCGTGGCCG AGCTGCGCGA CGCCGGGCGG GCCACGATCA GCCTGGAGAC GCCGGTCGGC
GACGAGGGGA GCGCCTCGGT GGCCGACCTG ATCGAGGACG CGGACGCGGC GAGCGCGTAC
GACGCGGTGG AGCAGGCGGC GTTCTCGTCG GAGCTGCGGG CGCTGGTCGA GACGCTGCCC
GCGCGGCAGG CGCTGATCGT GAGCAGGCGG TACGGGCTGA CCGACGGCCG GGTGCACACG
CTGCAGGAGG TCGCGGAGGA GCTGGGGCTC ACGCGCGAGC GGATCAGGCA GCTGGAGAAG
GAGTCGCTGC GGTTCCTGCG GGACCCGCAG CACAACCGAG GGCTGCTGGC CTGGGCCGGG
TGA
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| Protein sequence | MPLTKPNADQ SRRRASEQAA DADLFGQYLR QVGSTPLLTA AEEVVLSRRI EAGVYAEHLL
ADTAPTPARR RALNQVVADG RDAKDHMIRA NLRLVVSVAK KHSFRGLPLL DVVQEGNLGL
IRAVEKFDYS KGYKFSTYAI WWIRQAIERG LAEQTRTVRL PVHVVEELSK IKKAERKLRA
ELDREPTVEE LAGATGLRAP RVAELRDAGR ATISLETPVG DEGSASVADL IEDADAASAY
DAVEQAAFSS ELRALVETLP ARQALIVSRR YGLTDGRVHT LQEVAEELGL TRERIRQLEK
ESLRFLRDPQ HNRGLLAWAG
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